Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
TcraP01849 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
TcraP01849 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
TcraP01849 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
TcraP01849 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
TcraP01849 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC9.45□□□□□ -0.9
TcraP01849 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC9.45□□□□□ -0.9
TcraP01849 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC9.45□□□□□ -0.9
TcraP01849 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC9.45□□□□□ -0.9
TcraP01849 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
TcraP01849 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
TcraP01849 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC9.45□□□□□ -0.9
TcraP01849 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC9.45□□□□□ -0.9
TcraP01849 Gm27525-201ENSMUST00000184465 107 ntBASIC9.45□□□□□ -0.9
TcraP01849 AA619741-201ENSMUST00000195095 646 ntBASIC9.45□□□□□ -0.9
TcraP01849 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
TcraP01849 Gm18934-201ENSMUST00000216671 1044 ntBASIC9.45□□□□□ -0.9
TcraP01849 AC131710.1-201ENSMUST00000228336 990 ntBASIC9.45□□□□□ -0.9
TcraP01849 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
TcraP01849 Mir497b-201ENSMUST00000093601 125 ntBASIC9.45□□□□□ -0.9
TcraP01849 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
TcraP01849 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
TcraP01849 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC9.45□□□□□ -0.9
TcraP01849 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
TcraP01849 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
TcraP01849 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
TcraP01849 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
TcraP01849 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
TcraP01849 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC9.45□□□□□ -0.9
TcraP01849 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
TcraP01849 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
TcraP01849 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
TcraP01849 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
TcraP01849 BC001981-202ENSMUST00000191393 1545 ntBASIC9.45□□□□□ -0.9
TcraP01849 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
TcraP01849 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
TcraP01849 Gm1995-201ENSMUST00000220838 2602 ntBASIC9.45□□□□□ -0.9
TcraP01849 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
TcraP01849 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
TcraP01849 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
TcraP01849 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC9.45□□□□□ -0.9
TcraP01849 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
TcraP01849 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
TcraP01849 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
TcraP01849 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
TcraP01849 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC9.45□□□□□ -0.9
TcraP01849 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
TcraP01849 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
TcraP01849 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
TcraP01849 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
TcraP01849 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
TcraP01849 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
TcraP01849 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
TcraP01849 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
TcraP01849 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
TcraP01849 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
TcraP01849 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
TcraP01849 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
TcraP01849 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
TcraP01849 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
TcraP01849 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
TcraP01849 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC9.44□□□□□ -0.9
TcraP01849 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
TcraP01849 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
TcraP01849 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC9.44□□□□□ -0.9
TcraP01849 Gm14822-201ENSMUST00000122247 291 ntBASIC9.44□□□□□ -0.9
TcraP01849 Gm11594-201ENSMUST00000122313 162 ntBASIC9.44□□□□□ -0.9
TcraP01849 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC9.44□□□□□ -0.9
TcraP01849 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
TcraP01849 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC9.44□□□□□ -0.9
TcraP01849 Gm24513-201ENSMUST00000174964 138 ntBASIC9.44□□□□□ -0.9
TcraP01849 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
TcraP01849 Gm8116-201ENSMUST00000182917 1201 ntBASIC9.44□□□□□ -0.9
TcraP01849 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC9.44□□□□□ -0.9
TcraP01849 Gm27397-201ENSMUST00000184997 107 ntBASIC9.44□□□□□ -0.9
TcraP01849 Gm29310-201ENSMUST00000185468 696 ntBASIC9.44□□□□□ -0.9
TcraP01849 Gm21825-201ENSMUST00000185728 696 ntBASIC9.44□□□□□ -0.9
TcraP01849 Gm29109-201ENSMUST00000185895 696 ntBASIC9.44□□□□□ -0.9
TcraP01849 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC9.44□□□□□ -0.9
TcraP01849 Gm21896-201ENSMUST00000186520 696 ntBASIC9.44□□□□□ -0.9
TcraP01849 Gm21873-201ENSMUST00000186728 696 ntBASIC9.44□□□□□ -0.9
TcraP01849 Gm21794-201ENSMUST00000187056 696 ntBASIC9.44□□□□□ -0.9
TcraP01849 Gm21880-201ENSMUST00000187275 696 ntBASIC9.44□□□□□ -0.9
TcraP01849 Gm21826-201ENSMUST00000187451 696 ntBASIC9.44□□□□□ -0.9
TcraP01849 Gm21198-201ENSMUST00000188393 696 ntBASIC9.44□□□□□ -0.9
TcraP01849 Gm21749-201ENSMUST00000189343 696 ntBASIC9.44□□□□□ -0.9
TcraP01849 Gm21901-201ENSMUST00000189568 696 ntBASIC9.44□□□□□ -0.9
TcraP01849 Gm29424-201ENSMUST00000189716 696 ntBASIC9.44□□□□□ -0.9
TcraP01849 Gm28599-201ENSMUST00000189838 694 ntBASIC9.44□□□□□ -0.9
TcraP01849 Gm21867-201ENSMUST00000189917 696 ntBASIC9.44□□□□□ -0.9
TcraP01849 Gm29269-201ENSMUST00000190087 696 ntBASIC9.44□□□□□ -0.9
TcraP01849 Gm21722-201ENSMUST00000190153 696 ntBASIC9.44□□□□□ -0.9
TcraP01849 Gm28423-201ENSMUST00000190701 696 ntBASIC9.44□□□□□ -0.9
TcraP01849 Gm21899-201ENSMUST00000190745 696 ntBASIC9.44□□□□□ -0.9
TcraP01849 Gm21910-201ENSMUST00000191163 696 ntBASIC9.44□□□□□ -0.9
TcraP01849 Gm21849-201ENSMUST00000191571 696 ntBASIC9.44□□□□□ -0.9
TcraP01849 Gm28678-201ENSMUST00000191593 696 ntBASIC9.44□□□□□ -0.9
TcraP01849 Gm20910-201ENSMUST00000193268 696 ntBASIC9.44□□□□□ -0.9
TcraP01849 Gm21871-201ENSMUST00000194621 696 ntBASIC9.44□□□□□ -0.9
TcraP01849 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC9.44□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms