Protein–RNA interactions for Protein: O88874

Ccnk, Cyclin-K, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnkO88874 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
CcnkO88874 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
CcnkO88874 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
CcnkO88874 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CcnkO88874 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CcnkO88874 Gm13859-201ENSMUST00000119936 1423 ntBASIC11.57□□□□□ -0.56
CcnkO88874 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CcnkO88874 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CcnkO88874 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
CcnkO88874 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
CcnkO88874 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
CcnkO88874 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CcnkO88874 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
CcnkO88874 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
CcnkO88874 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CcnkO88874 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CcnkO88874 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC11.57□□□□□ -0.56
CcnkO88874 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CcnkO88874 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
CcnkO88874 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
CcnkO88874 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CcnkO88874 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CcnkO88874 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
CcnkO88874 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC11.56□□□□□ -0.56
CcnkO88874 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CcnkO88874 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CcnkO88874 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
CcnkO88874 Rab3c-202ENSMUST00000223922 2398 ntBASIC11.56□□□□□ -0.56
CcnkO88874 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
CcnkO88874 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CcnkO88874 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CcnkO88874 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CcnkO88874 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CcnkO88874 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
CcnkO88874 Gm15240-201ENSMUST00000118156 720 ntBASIC11.56□□□□□ -0.56
CcnkO88874 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CcnkO88874 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC11.56□□□□□ -0.56
CcnkO88874 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC11.56□□□□□ -0.56
CcnkO88874 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC11.56□□□□□ -0.56
CcnkO88874 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
CcnkO88874 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC11.56□□□□□ -0.56
CcnkO88874 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC11.56□□□□□ -0.56
CcnkO88874 Mir8102-201ENSMUST00000184148 139 ntBASIC11.56□□□□□ -0.56
CcnkO88874 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CcnkO88874 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
CcnkO88874 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CcnkO88874 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CcnkO88874 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CcnkO88874 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CcnkO88874 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CcnkO88874 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CcnkO88874 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
CcnkO88874 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
CcnkO88874 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CcnkO88874 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CcnkO88874 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CcnkO88874 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CcnkO88874 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
CcnkO88874 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CcnkO88874 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
CcnkO88874 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC11.56□□□□□ -0.56
CcnkO88874 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
CcnkO88874 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CcnkO88874 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
CcnkO88874 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CcnkO88874 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
CcnkO88874 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CcnkO88874 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CcnkO88874 Gm9544-201ENSMUST00000223349 2482 ntBASIC11.55□□□□□ -0.56
CcnkO88874 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC11.55□□□□□ -0.56
CcnkO88874 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC11.55□□□□□ -0.56
CcnkO88874 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CcnkO88874 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
CcnkO88874 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
CcnkO88874 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
CcnkO88874 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC11.55□□□□□ -0.56
CcnkO88874 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
CcnkO88874 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC11.55□□□□□ -0.56
CcnkO88874 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC11.55□□□□□ -0.56
CcnkO88874 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
CcnkO88874 Gm27838-201ENSMUST00000184829 128 ntBASIC11.55□□□□□ -0.56
CcnkO88874 Gm27772-201ENSMUST00000184900 187 ntBASIC11.55□□□□□ -0.56
CcnkO88874 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
CcnkO88874 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
CcnkO88874 Arhgef33-209ENSMUST00000225223 714 ntBASIC11.55□□□□□ -0.56
CcnkO88874 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CcnkO88874 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CcnkO88874 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CcnkO88874 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC11.55□□□□□ -0.56
CcnkO88874 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
CcnkO88874 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CcnkO88874 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
CcnkO88874 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC11.55□□□□□ -0.56
CcnkO88874 Gm14452-201ENSMUST00000118680 1632 ntBASIC11.55□□□□□ -0.56
CcnkO88874 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
CcnkO88874 CT009757.3-201ENSMUST00000223367 2320 ntBASIC11.55□□□□□ -0.56
CcnkO88874 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
CcnkO88874 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CcnkO88874 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CcnkO88874 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 83.1 ms