Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12.82□□□□□ -0.36
Pdlim1O70400 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.82□□□□□ -0.36
Pdlim1O70400 AC126253.1-201ENSMUST00000227974 824 ntBASIC12.82□□□□□ -0.36
Pdlim1O70400 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pdlim1O70400 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pdlim1O70400 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Pdlim1O70400 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Pdlim1O70400 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pdlim1O70400 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pdlim1O70400 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pdlim1O70400 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.82□□□□□ -0.36
Pdlim1O70400 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pdlim1O70400 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pdlim1O70400 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pdlim1O70400 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pdlim1O70400 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pdlim1O70400 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Pdlim1O70400 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.82□□□□□ -0.36
Pdlim1O70400 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.82□□□□□ -0.36
Pdlim1O70400 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pdlim1O70400 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pdlim1O70400 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Pdlim1O70400 Paupar-201ENSMUST00000194826 3482 ntBASIC12.82□□□□□ -0.36
Pdlim1O70400 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.82□□□□□ -0.36
Pdlim1O70400 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Pdlim1O70400 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pdlim1O70400 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pdlim1O70400 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.81□□□□□ -0.36
Pdlim1O70400 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pdlim1O70400 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pdlim1O70400 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC12.81□□□□□ -0.36
Pdlim1O70400 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Pdlim1O70400 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pdlim1O70400 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pdlim1O70400 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pdlim1O70400 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pdlim1O70400 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Pdlim1O70400 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pdlim1O70400 Gm11425-201ENSMUST00000119608 498 ntBASIC12.81□□□□□ -0.36
Pdlim1O70400 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Pdlim1O70400 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC12.81□□□□□ -0.36
Pdlim1O70400 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pdlim1O70400 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC12.81□□□□□ -0.36
Pdlim1O70400 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pdlim1O70400 Snora78-201ENSMUST00000158630 128 ntBASIC12.81□□□□□ -0.36
Pdlim1O70400 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC12.81□□□□□ -0.36
Pdlim1O70400 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC12.81□□□□□ -0.36
Pdlim1O70400 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.81□□□□□ -0.36
Pdlim1O70400 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.81□□□□□ -0.36
Pdlim1O70400 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pdlim1O70400 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pdlim1O70400 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pdlim1O70400 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pdlim1O70400 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pdlim1O70400 Gm9396-201ENSMUST00000076703 567 ntBASIC12.81□□□□□ -0.36
Pdlim1O70400 Gm25857-201ENSMUST00000082788 129 ntBASIC12.81□□□□□ -0.36
Pdlim1O70400 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pdlim1O70400 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pdlim1O70400 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.81□□□□□ -0.36
Pdlim1O70400 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pdlim1O70400 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pdlim1O70400 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Pdlim1O70400 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Pdlim1O70400 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pdlim1O70400 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pdlim1O70400 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pdlim1O70400 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pdlim1O70400 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pdlim1O70400 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pdlim1O70400 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pdlim1O70400 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Pdlim1O70400 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pdlim1O70400 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pdlim1O70400 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Pdlim1O70400 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pdlim1O70400 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pdlim1O70400 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pdlim1O70400 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pdlim1O70400 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.8□□□□□ -0.36
Pdlim1O70400 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pdlim1O70400 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pdlim1O70400 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pdlim1O70400 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Pdlim1O70400 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Pdlim1O70400 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pdlim1O70400 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC12.8□□□□□ -0.36
Pdlim1O70400 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Pdlim1O70400 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.8□□□□□ -0.36
Pdlim1O70400 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC12.8□□□□□ -0.36
Pdlim1O70400 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pdlim1O70400 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pdlim1O70400 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pdlim1O70400 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC12.8□□□□□ -0.36
Pdlim1O70400 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pdlim1O70400 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Pdlim1O70400 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pdlim1O70400 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.8□□□□□ -0.36
Pdlim1O70400 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pdlim1O70400 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pdlim1O70400 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 199.1 ms