Protein–RNA interactions for Protein: O55028

Bckdk, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, mousemouse

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdkO55028 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
BckdkO55028 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.03□□□□□ -0.48
BckdkO55028 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
BckdkO55028 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
BckdkO55028 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
BckdkO55028 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
BckdkO55028 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
BckdkO55028 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.03□□□□□ -0.48
BckdkO55028 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
BckdkO55028 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
BckdkO55028 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
BckdkO55028 Gm5687-201ENSMUST00000118252 640 ntBASIC12.03□□□□□ -0.48
BckdkO55028 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
BckdkO55028 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC12.03□□□□□ -0.48
BckdkO55028 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
BckdkO55028 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
BckdkO55028 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
BckdkO55028 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
BckdkO55028 Gm43818-201ENSMUST00000200605 466 ntBASIC12.03□□□□□ -0.48
BckdkO55028 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC12.03□□□□□ -0.48
BckdkO55028 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
BckdkO55028 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
BckdkO55028 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
BckdkO55028 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
BckdkO55028 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
BckdkO55028 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
BckdkO55028 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
BckdkO55028 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.03□□□□□ -0.48
BckdkO55028 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
BckdkO55028 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
BckdkO55028 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
BckdkO55028 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC12.03□□□□□ -0.48
BckdkO55028 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
BckdkO55028 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
BckdkO55028 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
BckdkO55028 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
BckdkO55028 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
BckdkO55028 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
BckdkO55028 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
BckdkO55028 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
BckdkO55028 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
BckdkO55028 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
BckdkO55028 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
BckdkO55028 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
BckdkO55028 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
BckdkO55028 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.48
BckdkO55028 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
BckdkO55028 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.02□□□□□ -0.48
BckdkO55028 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
BckdkO55028 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
BckdkO55028 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
BckdkO55028 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.02□□□□□ -0.48
BckdkO55028 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
BckdkO55028 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
BckdkO55028 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
BckdkO55028 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
BckdkO55028 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
BckdkO55028 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.02□□□□□ -0.49
BckdkO55028 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
BckdkO55028 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.49
BckdkO55028 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
BckdkO55028 Gm12384-201ENSMUST00000119228 919 ntBASIC12.02□□□□□ -0.49
BckdkO55028 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
BckdkO55028 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
BckdkO55028 Gm22331-201ENSMUST00000158066 136 ntBASIC12.02□□□□□ -0.49
BckdkO55028 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC12.02□□□□□ -0.49
BckdkO55028 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
BckdkO55028 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
BckdkO55028 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.02□□□□□ -0.49
BckdkO55028 Gm26315-201ENSMUST00000083890 321 ntBASIC12.02□□□□□ -0.49
BckdkO55028 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC12.02□□□□□ -0.49
BckdkO55028 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
BckdkO55028 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
BckdkO55028 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
BckdkO55028 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
BckdkO55028 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
BckdkO55028 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
BckdkO55028 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
BckdkO55028 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
BckdkO55028 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
BckdkO55028 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
BckdkO55028 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
BckdkO55028 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
BckdkO55028 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
BckdkO55028 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
BckdkO55028 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
BckdkO55028 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
BckdkO55028 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
BckdkO55028 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.02□□□□□ -0.49
BckdkO55028 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
BckdkO55028 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
BckdkO55028 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.49
BckdkO55028 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
BckdkO55028 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
BckdkO55028 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
BckdkO55028 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.01□□□□□ -0.49
BckdkO55028 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.01□□□□□ -0.49
BckdkO55028 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
BckdkO55028 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
BckdkO55028 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms