Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Npc1O35604 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Npc1O35604 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Npc1O35604 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Npc1O35604 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Npc1O35604 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Npc1O35604 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Npc1O35604 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.66□□□□□ -0.38
Npc1O35604 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Npc1O35604 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Npc1O35604 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Npc1O35604 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Npc1O35604 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Npc1O35604 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Npc1O35604 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
Npc1O35604 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Npc1O35604 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Npc1O35604 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Npc1O35604 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
Npc1O35604 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Npc1O35604 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Npc1O35604 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Npc1O35604 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.65□□□□□ -0.38
Npc1O35604 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Npc1O35604 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Npc1O35604 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Npc1O35604 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Npc1O35604 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Npc1O35604 Gm13369-201ENSMUST00000119442 987 ntBASIC12.65□□□□□ -0.38
Npc1O35604 Gm13123-201ENSMUST00000122173 492 ntBASIC12.65□□□□□ -0.38
Npc1O35604 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC12.65□□□□□ -0.38
Npc1O35604 Mir1938-201ENSMUST00000158746 100 ntBASIC12.65□□□□□ -0.38
Npc1O35604 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Npc1O35604 Gm27514-201ENSMUST00000183692 110 ntBASIC12.65□□□□□ -0.38
Npc1O35604 Gm27682-201ENSMUST00000183930 110 ntBASIC12.65□□□□□ -0.38
Npc1O35604 Gm5370-201ENSMUST00000187187 574 ntBASIC12.65□□□□□ -0.38
Npc1O35604 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Npc1O35604 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Npc1O35604 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Npc1O35604 Gm10268-201ENSMUST00000085340 555 ntBASIC12.65□□□□□ -0.38
Npc1O35604 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Npc1O35604 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Npc1O35604 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Npc1O35604 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Npc1O35604 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Npc1O35604 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
Npc1O35604 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Npc1O35604 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Npc1O35604 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC12.65□□□□□ -0.38
Npc1O35604 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Npc1O35604 AC131068.2-201ENSMUST00000226175 1453 ntBASIC12.65□□□□□ -0.38
Npc1O35604 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Npc1O35604 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.64□□□□□ -0.39
Npc1O35604 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Npc1O35604 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Npc1O35604 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Npc1O35604 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.64□□□□□ -0.39
Npc1O35604 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.64□□□□□ -0.39
Npc1O35604 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Npc1O35604 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Npc1O35604 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Npc1O35604 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Npc1O35604 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Npc1O35604 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.64□□□□□ -0.39
Npc1O35604 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Npc1O35604 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Npc1O35604 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Npc1O35604 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.64□□□□□ -0.39
Npc1O35604 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Npc1O35604 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Npc1O35604 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC12.64□□□□□ -0.39
Npc1O35604 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Npc1O35604 Gm43438-201ENSMUST00000198133 379 ntBASIC12.64□□□□□ -0.39
Npc1O35604 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC12.64□□□□□ -0.39
Npc1O35604 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Npc1O35604 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Npc1O35604 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Npc1O35604 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.64□□□□□ -0.39
Npc1O35604 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.64□□□□□ -0.39
Npc1O35604 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Npc1O35604 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Npc1O35604 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Npc1O35604 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.64□□□□□ -0.39
Npc1O35604 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Npc1O35604 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Npc1O35604 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Npc1O35604 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Npc1O35604 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Npc1O35604 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Npc1O35604 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.63□□□□□ -0.39
Npc1O35604 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Npc1O35604 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.63□□□□□ -0.39
Npc1O35604 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.63□□□□□ -0.39
Npc1O35604 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.63□□□□□ -0.39
Npc1O35604 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Npc1O35604 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Npc1O35604 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Npc1O35604 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Npc1O35604 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.63□□□□□ -0.39
Npc1O35604 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms