Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Slc1a6O35544 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Slc1a6O35544 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Slc1a6O35544 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Slc1a6O35544 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Slc1a6O35544 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Slc1a6O35544 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Slc1a6O35544 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Slc1a6O35544 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Slc1a6O35544 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.76□□□□□ -0.37
Slc1a6O35544 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Slc1a6O35544 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Slc1a6O35544 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Slc1a6O35544 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Slc1a6O35544 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
Slc1a6O35544 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Slc1a6O35544 Gm13223-201ENSMUST00000118609 747 ntBASIC12.76□□□□□ -0.37
Slc1a6O35544 Gm11978-201ENSMUST00000122315 466 ntBASIC12.76□□□□□ -0.37
Slc1a6O35544 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC12.76□□□□□ -0.37
Slc1a6O35544 Gm9522-201ENSMUST00000182394 926 ntBASIC12.76□□□□□ -0.37
Slc1a6O35544 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Slc1a6O35544 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC12.76□□□□□ -0.37
Slc1a6O35544 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Slc1a6O35544 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Slc1a6O35544 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.76□□□□□ -0.37
Slc1a6O35544 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC12.76□□□□□ -0.37
Slc1a6O35544 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Slc1a6O35544 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Slc1a6O35544 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.76□□□□□ -0.37
Slc1a6O35544 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Slc1a6O35544 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Slc1a6O35544 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Slc1a6O35544 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Slc1a6O35544 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.76□□□□□ -0.37
Slc1a6O35544 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Slc1a6O35544 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Slc1a6O35544 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Slc1a6O35544 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Slc1a6O35544 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Slc1a6O35544 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Slc1a6O35544 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Slc1a6O35544 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Slc1a6O35544 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Slc1a6O35544 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Slc1a6O35544 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC12.75□□□□□ -0.37
Slc1a6O35544 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Slc1a6O35544 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
Slc1a6O35544 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Slc1a6O35544 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Slc1a6O35544 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC12.75□□□□□ -0.37
Slc1a6O35544 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Slc1a6O35544 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Slc1a6O35544 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Slc1a6O35544 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Slc1a6O35544 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Slc1a6O35544 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Slc1a6O35544 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Slc1a6O35544 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Slc1a6O35544 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.75□□□□□ -0.37
Slc1a6O35544 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Slc1a6O35544 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Slc1a6O35544 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Slc1a6O35544 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC12.75□□□□□ -0.37
Slc1a6O35544 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Slc1a6O35544 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Slc1a6O35544 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Slc1a6O35544 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Slc1a6O35544 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Slc1a6O35544 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Slc1a6O35544 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Slc1a6O35544 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Slc1a6O35544 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Slc1a6O35544 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Slc1a6O35544 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Slc1a6O35544 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Slc1a6O35544 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Slc1a6O35544 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Slc1a6O35544 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Slc1a6O35544 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Slc1a6O35544 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Slc1a6O35544 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Slc1a6O35544 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Slc1a6O35544 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.74□□□□□ -0.37
Slc1a6O35544 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Slc1a6O35544 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Slc1a6O35544 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.74□□□□□ -0.37
Slc1a6O35544 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.74□□□□□ -0.37
Slc1a6O35544 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.74□□□□□ -0.37
Slc1a6O35544 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Slc1a6O35544 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Slc1a6O35544 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Slc1a6O35544 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Slc1a6O35544 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC12.74□□□□□ -0.37
Slc1a6O35544 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.74□□□□□ -0.37
Slc1a6O35544 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Slc1a6O35544 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Slc1a6O35544 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.74□□□□□ -0.37
Slc1a6O35544 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.74□□□□□ -0.37
Slc1a6O35544 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Slc1a6O35544 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms