Protein–RNA interactions for Protein: O35526

Stx1a, Syntaxin-1A, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1aO35526 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Stx1aO35526 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Stx1aO35526 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Stx1aO35526 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Stx1aO35526 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Stx1aO35526 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Stx1aO35526 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Stx1aO35526 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Stx1aO35526 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC14.55□□□□□ -0.08
Stx1aO35526 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Stx1aO35526 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Stx1aO35526 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Stx1aO35526 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Stx1aO35526 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC14.55□□□□□ -0.08
Stx1aO35526 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Stx1aO35526 Gm23935-201ENSMUST00000102303 57 ntBASIC14.55□□□□□ -0.08
Stx1aO35526 Gm24270-201ENSMUST00000102326 57 ntBASIC14.55□□□□□ -0.08
Stx1aO35526 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Stx1aO35526 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC14.55□□□□□ -0.08
Stx1aO35526 Gm11978-201ENSMUST00000122315 466 ntBASIC14.55□□□□□ -0.08
Stx1aO35526 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC14.55□□□□□ -0.08
Stx1aO35526 Gm24245-201ENSMUST00000157318 57 ntBASIC14.55□□□□□ -0.08
Stx1aO35526 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Stx1aO35526 AC126408.1-201ENSMUST00000225184 523 ntBASIC14.55□□□□□ -0.08
Stx1aO35526 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Stx1aO35526 Gm20445-201ENSMUST00000061905 565 ntBASIC14.55□□□□□ -0.08
Stx1aO35526 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Stx1aO35526 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Stx1aO35526 Gm8617-201ENSMUST00000118796 2222 ntBASIC14.55□□□□□ -0.08
Stx1aO35526 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Stx1aO35526 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Stx1aO35526 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Stx1aO35526 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Stx1aO35526 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Stx1aO35526 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Stx1aO35526 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Stx1aO35526 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Stx1aO35526 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Stx1aO35526 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Stx1aO35526 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Stx1aO35526 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Stx1aO35526 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Stx1aO35526 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Stx1aO35526 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Stx1aO35526 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Stx1aO35526 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC14.54□□□□□ -0.08
Stx1aO35526 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Stx1aO35526 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Stx1aO35526 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Stx1aO35526 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC14.54□□□□□ -0.08
Stx1aO35526 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC14.54□□□□□ -0.08
Stx1aO35526 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Stx1aO35526 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC14.54□□□□□ -0.08
Stx1aO35526 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Stx1aO35526 Gm9797-201ENSMUST00000052902 613 ntBASIC14.54□□□□□ -0.08
Stx1aO35526 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Stx1aO35526 AC159621.2-201ENSMUST00000223519 1326 ntBASIC14.54□□□□□ -0.08
Stx1aO35526 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Stx1aO35526 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Stx1aO35526 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Stx1aO35526 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Stx1aO35526 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Stx1aO35526 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Stx1aO35526 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Stx1aO35526 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Stx1aO35526 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Stx1aO35526 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Stx1aO35526 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Stx1aO35526 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC14.54□□□□□ -0.08
Stx1aO35526 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Stx1aO35526 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Stx1aO35526 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Stx1aO35526 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Stx1aO35526 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Stx1aO35526 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Stx1aO35526 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Stx1aO35526 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Stx1aO35526 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Stx1aO35526 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Stx1aO35526 Gm6263-201ENSMUST00000120029 1342 ntBASIC14.53□□□□□ -0.08
Stx1aO35526 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Stx1aO35526 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC14.53□□□□□ -0.08
Stx1aO35526 Gm13616-201ENSMUST00000120600 222 ntBASIC14.53□□□□□ -0.08
Stx1aO35526 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC14.53□□□□□ -0.08
Stx1aO35526 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Stx1aO35526 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Stx1aO35526 Gm44124-201ENSMUST00000204159 472 ntBASIC14.53□□□□□ -0.08
Stx1aO35526 AC135669.1-202ENSMUST00000216742 540 ntBASIC14.53□□□□□ -0.08
Stx1aO35526 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC14.53□□□□□ -0.08
Stx1aO35526 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Stx1aO35526 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Stx1aO35526 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Stx1aO35526 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Stx1aO35526 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Stx1aO35526 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Stx1aO35526 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Stx1aO35526 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Stx1aO35526 Nupl1-206ENSMUST00000225111 2936 ntBASIC14.53□□□□□ -0.08
Stx1aO35526 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Stx1aO35526 Gm27177-202ENSMUST00000183514 2703 ntBASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 114.9 ms