Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 Ighv4-2-201ENSMUST00000192975 362 ntBASIC19.54■□□□□ 0.72
Polr1aO35134 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC19.54■□□□□ 0.72
Polr1aO35134 Gm1821-202ENSMUST00000227415 750 ntBASIC19.54■□□□□ 0.72
Polr1aO35134 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Polr1aO35134 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Polr1aO35134 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC19.54■□□□□ 0.72
Polr1aO35134 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC19.54■□□□□ 0.72
Polr1aO35134 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Polr1aO35134 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Polr1aO35134 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Polr1aO35134 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC19.54■□□□□ 0.72
Polr1aO35134 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Polr1aO35134 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC19.54■□□□□ 0.72
Polr1aO35134 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Polr1aO35134 Gm28719-201ENSMUST00000187779 1757 ntBASIC19.54■□□□□ 0.72
Polr1aO35134 Gm44999-201ENSMUST00000207456 1493 ntBASIC19.54■□□□□ 0.72
Polr1aO35134 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Polr1aO35134 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Polr1aO35134 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Polr1aO35134 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
Polr1aO35134 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Polr1aO35134 Gm23596-201ENSMUST00000104304 132 ntBASIC19.54■□□□□ 0.72
Polr1aO35134 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Polr1aO35134 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
Polr1aO35134 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Polr1aO35134 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Polr1aO35134 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC19.54■□□□□ 0.72
Polr1aO35134 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Polr1aO35134 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Polr1aO35134 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Polr1aO35134 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC19.53■□□□□ 0.72
Polr1aO35134 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Polr1aO35134 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Polr1aO35134 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Polr1aO35134 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Polr1aO35134 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Polr1aO35134 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Polr1aO35134 Ap5m1-205ENSMUST00000227431 3757 ntBASIC19.53■□□□□ 0.72
Polr1aO35134 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Polr1aO35134 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Polr1aO35134 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Polr1aO35134 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Polr1aO35134 Gm23085-201ENSMUST00000157849 293 ntBASIC19.53■□□□□ 0.72
Polr1aO35134 Mir7677-201ENSMUST00000184226 67 ntBASIC19.53■□□□□ 0.72
Polr1aO35134 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Polr1aO35134 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
Polr1aO35134 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Polr1aO35134 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Polr1aO35134 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Polr1aO35134 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Polr1aO35134 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC19.52■□□□□ 0.72
Polr1aO35134 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Polr1aO35134 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Polr1aO35134 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Polr1aO35134 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Polr1aO35134 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
Polr1aO35134 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Polr1aO35134 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Polr1aO35134 Gm27438-201ENSMUST00000183480 110 ntBASIC19.52■□□□□ 0.72
Polr1aO35134 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC19.52■□□□□ 0.72
Polr1aO35134 AC135469.1-201ENSMUST00000225984 772 ntBASIC19.52■□□□□ 0.72
Polr1aO35134 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Polr1aO35134 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Polr1aO35134 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Polr1aO35134 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Polr1aO35134 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Polr1aO35134 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Polr1aO35134 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Polr1aO35134 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Polr1aO35134 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Polr1aO35134 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Polr1aO35134 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Polr1aO35134 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Polr1aO35134 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Polr1aO35134 Mup-ps26-201ENSMUST00000121751 202 ntBASIC19.51■□□□□ 0.71
Polr1aO35134 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC19.51■□□□□ 0.71
Polr1aO35134 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Polr1aO35134 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Polr1aO35134 Gm43184-201ENSMUST00000197247 542 ntBASIC19.51■□□□□ 0.71
Polr1aO35134 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Polr1aO35134 Gm807-202ENSMUST00000224929 408 ntBASIC19.51■□□□□ 0.71
Polr1aO35134 AC093022.5-201ENSMUST00000226841 1079 ntBASIC19.51■□□□□ 0.71
Polr1aO35134 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Polr1aO35134 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Polr1aO35134 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Polr1aO35134 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Polr1aO35134 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC19.51■□□□□ 0.71
Polr1aO35134 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Polr1aO35134 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Polr1aO35134 AC171277.1-201ENSMUST00000216902 1441 ntBASIC19.51■□□□□ 0.71
Polr1aO35134 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Polr1aO35134 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Polr1aO35134 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Polr1aO35134 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Polr1aO35134 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Polr1aO35134 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Polr1aO35134 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Polr1aO35134 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Polr1aO35134 Gm8365-201ENSMUST00000197334 648 ntBASIC19.51■□□□□ 0.71
Polr1aO35134 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms