Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ebf3O08791 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ebf3O08791 Gm38049-201ENSMUST00000195698 1372 ntBASIC13.48□□□□□ -0.25
Ebf3O08791 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ebf3O08791 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ebf3O08791 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ebf3O08791 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ebf3O08791 Gm9431-201ENSMUST00000119765 1051 ntBASIC13.48□□□□□ -0.25
Ebf3O08791 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ebf3O08791 Gm18827-201ENSMUST00000188341 790 ntBASIC13.48□□□□□ -0.25
Ebf3O08791 Gm6621-201ENSMUST00000193251 772 ntBASIC13.48□□□□□ -0.25
Ebf3O08791 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ebf3O08791 AC132384.14-201ENSMUST00000219346 1147 ntBASIC13.48□□□□□ -0.25
Ebf3O08791 Gm19163-201ENSMUST00000223313 780 ntBASIC13.48□□□□□ -0.25
Ebf3O08791 CT485787.1-201ENSMUST00000225617 968 ntBASIC13.48□□□□□ -0.25
Ebf3O08791 AC093022.1-201ENSMUST00000226949 1072 ntBASIC13.48□□□□□ -0.25
Ebf3O08791 AC134335.2-201ENSMUST00000227660 440 ntBASIC13.48□□□□□ -0.25
Ebf3O08791 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ebf3O08791 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC13.48□□□□□ -0.25
Ebf3O08791 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ebf3O08791 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ebf3O08791 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ebf3O08791 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ebf3O08791 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ebf3O08791 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ebf3O08791 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ebf3O08791 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Ebf3O08791 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ebf3O08791 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Ebf3O08791 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ebf3O08791 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Ebf3O08791 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Ebf3O08791 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ebf3O08791 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ebf3O08791 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ebf3O08791 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Ebf3O08791 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Ebf3O08791 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ebf3O08791 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ebf3O08791 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ebf3O08791 Gm37133-201ENSMUST00000192705 1922 ntBASIC13.47□□□□□ -0.25
Ebf3O08791 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ebf3O08791 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ebf3O08791 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
Ebf3O08791 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ebf3O08791 Mir877-201ENSMUST00000104738 85 ntBASIC13.47□□□□□ -0.25
Ebf3O08791 Gm26185-201ENSMUST00000157692 266 ntBASIC13.47□□□□□ -0.25
Ebf3O08791 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC13.47□□□□□ -0.25
Ebf3O08791 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ebf3O08791 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ebf3O08791 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.47□□□□□ -0.25
Ebf3O08791 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.47□□□□□ -0.25
Ebf3O08791 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ebf3O08791 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ebf3O08791 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ebf3O08791 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ebf3O08791 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ebf3O08791 Gm45743-201ENSMUST00000212701 2795 ntBASIC13.47□□□□□ -0.25
Ebf3O08791 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Ebf3O08791 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ebf3O08791 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ebf3O08791 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ebf3O08791 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ebf3O08791 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ebf3O08791 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ebf3O08791 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.46□□□□□ -0.25
Ebf3O08791 Gm3756-201ENSMUST00000169182 1355 ntBASIC13.46□□□□□ -0.25
Ebf3O08791 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
Ebf3O08791 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC13.46□□□□□ -0.25
Ebf3O08791 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ebf3O08791 Gm8793-201ENSMUST00000183069 1303 ntBASIC13.46□□□□□ -0.25
Ebf3O08791 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Ebf3O08791 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ebf3O08791 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC13.46□□□□□ -0.25
Ebf3O08791 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ebf3O08791 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC13.46□□□□□ -0.25
Ebf3O08791 Gm13297-201ENSMUST00000120205 934 ntBASIC13.46□□□□□ -0.25
Ebf3O08791 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC13.46□□□□□ -0.25
Ebf3O08791 Gm37259-201ENSMUST00000193903 849 ntBASIC13.46□□□□□ -0.25
Ebf3O08791 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC13.46□□□□□ -0.25
Ebf3O08791 Gm44985-201ENSMUST00000206202 1016 ntBASIC13.46□□□□□ -0.25
Ebf3O08791 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC13.46□□□□□ -0.25
Ebf3O08791 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ebf3O08791 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ebf3O08791 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ebf3O08791 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Ebf3O08791 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ebf3O08791 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Ebf3O08791 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ebf3O08791 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ebf3O08791 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ebf3O08791 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ebf3O08791 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Ebf3O08791 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Ebf3O08791 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Ebf3O08791 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ebf3O08791 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ebf3O08791 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ebf3O08791 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC13.45□□□□□ -0.26
Ebf3O08791 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms