Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shisa8J3QNX5 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shisa8J3QNX5 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shisa8J3QNX5 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Shisa8J3QNX5 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Shisa8J3QNX5 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shisa8J3QNX5 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC11.81□□□□□ -0.52
Shisa8J3QNX5 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Shisa8J3QNX5 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Shisa8J3QNX5 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC11.81□□□□□ -0.52
Shisa8J3QNX5 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC11.81□□□□□ -0.52
Shisa8J3QNX5 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Shisa8J3QNX5 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shisa8J3QNX5 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shisa8J3QNX5 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shisa8J3QNX5 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shisa8J3QNX5 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shisa8J3QNX5 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Shisa8J3QNX5 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Shisa8J3QNX5 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC11.81□□□□□ -0.52
Shisa8J3QNX5 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shisa8J3QNX5 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Shisa8J3QNX5 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shisa8J3QNX5 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shisa8J3QNX5 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Shisa8J3QNX5 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Shisa8J3QNX5 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shisa8J3QNX5 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Shisa8J3QNX5 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shisa8J3QNX5 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shisa8J3QNX5 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shisa8J3QNX5 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Shisa8J3QNX5 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shisa8J3QNX5 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shisa8J3QNX5 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC11.8□□□□□ -0.52
Shisa8J3QNX5 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shisa8J3QNX5 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Shisa8J3QNX5 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shisa8J3QNX5 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC11.8□□□□□ -0.52
Shisa8J3QNX5 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC11.8□□□□□ -0.52
Shisa8J3QNX5 Gm27397-201ENSMUST00000184997 107 ntBASIC11.8□□□□□ -0.52
Shisa8J3QNX5 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC11.8□□□□□ -0.52
Shisa8J3QNX5 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC11.8□□□□□ -0.52
Shisa8J3QNX5 AC134335.2-201ENSMUST00000227660 440 ntBASIC11.8□□□□□ -0.52
Shisa8J3QNX5 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shisa8J3QNX5 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shisa8J3QNX5 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Shisa8J3QNX5 Gm5161-201ENSMUST00000075243 853 ntBASIC11.8□□□□□ -0.52
Shisa8J3QNX5 Gm24447-201ENSMUST00000083977 338 ntBASIC11.8□□□□□ -0.52
Shisa8J3QNX5 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shisa8J3QNX5 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shisa8J3QNX5 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shisa8J3QNX5 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Shisa8J3QNX5 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Shisa8J3QNX5 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shisa8J3QNX5 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shisa8J3QNX5 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Shisa8J3QNX5 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shisa8J3QNX5 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Shisa8J3QNX5 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Shisa8J3QNX5 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shisa8J3QNX5 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shisa8J3QNX5 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shisa8J3QNX5 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Shisa8J3QNX5 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shisa8J3QNX5 Gm6210-201ENSMUST00000204734 1942 ntBASIC11.8□□□□□ -0.52
Shisa8J3QNX5 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.8□□□□□ -0.52
Shisa8J3QNX5 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Shisa8J3QNX5 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shisa8J3QNX5 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
Shisa8J3QNX5 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shisa8J3QNX5 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shisa8J3QNX5 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Shisa8J3QNX5 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shisa8J3QNX5 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shisa8J3QNX5 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Shisa8J3QNX5 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shisa8J3QNX5 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shisa8J3QNX5 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shisa8J3QNX5 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shisa8J3QNX5 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shisa8J3QNX5 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Shisa8J3QNX5 Gm12485-201ENSMUST00000119641 291 ntBASIC11.79□□□□□ -0.52
Shisa8J3QNX5 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shisa8J3QNX5 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC11.79□□□□□ -0.52
Shisa8J3QNX5 Gm24513-201ENSMUST00000174964 138 ntBASIC11.79□□□□□ -0.52
Shisa8J3QNX5 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shisa8J3QNX5 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Shisa8J3QNX5 Gm27680-201ENSMUST00000184192 160 ntBASIC11.79□□□□□ -0.52
Shisa8J3QNX5 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Shisa8J3QNX5 Gm5867-201ENSMUST00000063197 592 ntBASIC11.79□□□□□ -0.52
Shisa8J3QNX5 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shisa8J3QNX5 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shisa8J3QNX5 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Shisa8J3QNX5 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Shisa8J3QNX5 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Shisa8J3QNX5 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shisa8J3QNX5 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shisa8J3QNX5 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC11.79□□□□□ -0.52
Shisa8J3QNX5 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms