Protein–RNA interactions for Protein: H3BKF4

Gm20708, Predicted gene 20708, mousemouse

Predictions only

Length 155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm20708H3BKF4 Gm43416-201ENSMUST00000201916 1015 ntBASIC10.84□□□□□ -0.67
Gm20708H3BKF4 Gm4768-201ENSMUST00000206199 686 ntBASIC10.84□□□□□ -0.67
Gm20708H3BKF4 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
Gm20708H3BKF4 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Gm20708H3BKF4 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm20708H3BKF4 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm20708H3BKF4 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm20708H3BKF4 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm20708H3BKF4 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm20708H3BKF4 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Gm20708H3BKF4 n-R5s77-201ENSMUST00000083757 119 ntBASIC10.84□□□□□ -0.67
Gm20708H3BKF4 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Gm20708H3BKF4 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC10.84□□□□□ -0.67
Gm20708H3BKF4 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm20708H3BKF4 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm20708H3BKF4 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Gm20708H3BKF4 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm20708H3BKF4 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Gm20708H3BKF4 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm20708H3BKF4 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Gm20708H3BKF4 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Gm20708H3BKF4 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Gm20708H3BKF4 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm20708H3BKF4 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Gm20708H3BKF4 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm20708H3BKF4 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Gm20708H3BKF4 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Gm20708H3BKF4 Gm6210-201ENSMUST00000204734 1942 ntBASIC10.84□□□□□ -0.67
Gm20708H3BKF4 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm20708H3BKF4 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Gm20708H3BKF4 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm20708H3BKF4 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Gm20708H3BKF4 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Gm20708H3BKF4 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm20708H3BKF4 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
Gm20708H3BKF4 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm20708H3BKF4 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm20708H3BKF4 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm20708H3BKF4 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm20708H3BKF4 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm20708H3BKF4 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm20708H3BKF4 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm20708H3BKF4 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Gm20708H3BKF4 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm20708H3BKF4 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Gm20708H3BKF4 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm20708H3BKF4 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC10.83□□□□□ -0.68
Gm20708H3BKF4 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Gm20708H3BKF4 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm20708H3BKF4 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm20708H3BKF4 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC10.83□□□□□ -0.68
Gm20708H3BKF4 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm20708H3BKF4 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC10.83□□□□□ -0.68
Gm20708H3BKF4 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Gm20708H3BKF4 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Gm20708H3BKF4 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Gm20708H3BKF4 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Gm20708H3BKF4 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Gm20708H3BKF4 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Gm20708H3BKF4 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Gm20708H3BKF4 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC10.83□□□□□ -0.68
Gm20708H3BKF4 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Gm20708H3BKF4 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC10.83□□□□□ -0.68
Gm20708H3BKF4 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Gm20708H3BKF4 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC10.83□□□□□ -0.68
Gm20708H3BKF4 Gm6222-202ENSMUST00000182143 629 ntBASIC10.83□□□□□ -0.68
Gm20708H3BKF4 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC10.83□□□□□ -0.68
Gm20708H3BKF4 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Gm20708H3BKF4 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm20708H3BKF4 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC10.83□□□□□ -0.68
Gm20708H3BKF4 AC022775.2-201ENSMUST00000227885 646 ntBASIC10.83□□□□□ -0.68
Gm20708H3BKF4 AC140451.2-201ENSMUST00000228030 664 ntBASIC10.83□□□□□ -0.68
Gm20708H3BKF4 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm20708H3BKF4 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm20708H3BKF4 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Gm20708H3BKF4 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm20708H3BKF4 Gm10305-201ENSMUST00000195331 2475 ntBASIC10.83□□□□□ -0.68
Gm20708H3BKF4 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC10.83□□□□□ -0.68
Gm20708H3BKF4 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Gm20708H3BKF4 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Gm20708H3BKF4 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm20708H3BKF4 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC10.83□□□□□ -0.68
Gm20708H3BKF4 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Gm20708H3BKF4 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Gm20708H3BKF4 Gm5620-201ENSMUST00000077991 1348 ntBASIC10.83□□□□□ -0.68
Gm20708H3BKF4 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC10.83□□□□□ -0.68
Gm20708H3BKF4 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm20708H3BKF4 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm20708H3BKF4 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm20708H3BKF4 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm20708H3BKF4 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm20708H3BKF4 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC10.82□□□□□ -0.68
Gm20708H3BKF4 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC10.82□□□□□ -0.68
Gm20708H3BKF4 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm20708H3BKF4 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm20708H3BKF4 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Gm20708H3BKF4 Gm38385-201ENSMUST00000194454 2351 ntBASIC10.82□□□□□ -0.68
Gm20708H3BKF4 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC10.82□□□□□ -0.68
Gm20708H3BKF4 Gm44775-201ENSMUST00000207266 1456 ntBASIC10.82□□□□□ -0.68
Gm20708H3BKF4 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms