Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Gm13296-201ENSMUST00000117854 997 ntBASIC15.56■□□□□ 0.08
NpcdF8VQB8 Gm12058-201ENSMUST00000118614 437 ntBASIC15.56■□□□□ 0.08
NpcdF8VQB8 Gm11978-201ENSMUST00000122315 466 ntBASIC15.56■□□□□ 0.08
NpcdF8VQB8 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC15.56■□□□□ 0.08
NpcdF8VQB8 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC15.56■□□□□ 0.08
NpcdF8VQB8 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NpcdF8VQB8 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NpcdF8VQB8 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC15.56■□□□□ 0.08
NpcdF8VQB8 Gm18730-201ENSMUST00000218038 343 ntBASIC15.56■□□□□ 0.08
NpcdF8VQB8 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
NpcdF8VQB8 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
NpcdF8VQB8 AC101945.2-201ENSMUST00000227886 1377 ntBASIC15.56■□□□□ 0.08
NpcdF8VQB8 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
NpcdF8VQB8 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NpcdF8VQB8 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NpcdF8VQB8 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NpcdF8VQB8 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC15.56■□□□□ 0.08
NpcdF8VQB8 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NpcdF8VQB8 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
NpcdF8VQB8 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NpcdF8VQB8 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NpcdF8VQB8 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NpcdF8VQB8 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NpcdF8VQB8 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NpcdF8VQB8 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NpcdF8VQB8 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NpcdF8VQB8 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NpcdF8VQB8 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NpcdF8VQB8 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
NpcdF8VQB8 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
NpcdF8VQB8 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
NpcdF8VQB8 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NpcdF8VQB8 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
NpcdF8VQB8 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NpcdF8VQB8 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
NpcdF8VQB8 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
NpcdF8VQB8 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NpcdF8VQB8 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
NpcdF8VQB8 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC15.55■□□□□ 0.08
NpcdF8VQB8 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NpcdF8VQB8 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
NpcdF8VQB8 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
NpcdF8VQB8 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NpcdF8VQB8 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NpcdF8VQB8 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
NpcdF8VQB8 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NpcdF8VQB8 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NpcdF8VQB8 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NpcdF8VQB8 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC15.55■□□□□ 0.08
NpcdF8VQB8 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NpcdF8VQB8 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC15.55■□□□□ 0.08
NpcdF8VQB8 Gm19459-201ENSMUST00000176240 835 ntBASIC15.55■□□□□ 0.08
NpcdF8VQB8 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NpcdF8VQB8 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC15.55■□□□□ 0.08
NpcdF8VQB8 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NpcdF8VQB8 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NpcdF8VQB8 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NpcdF8VQB8 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NpcdF8VQB8 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NpcdF8VQB8 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NpcdF8VQB8 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NpcdF8VQB8 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NpcdF8VQB8 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NpcdF8VQB8 Gm8228-201ENSMUST00000189949 2192 ntBASIC15.55■□□□□ 0.08
NpcdF8VQB8 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NpcdF8VQB8 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC15.54■□□□□ 0.08
NpcdF8VQB8 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NpcdF8VQB8 Gm45495-201ENSMUST00000200940 1700 ntBASIC15.54■□□□□ 0.08
NpcdF8VQB8 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NpcdF8VQB8 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
NpcdF8VQB8 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
NpcdF8VQB8 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC15.54■□□□□ 0.08
NpcdF8VQB8 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
NpcdF8VQB8 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
NpcdF8VQB8 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
NpcdF8VQB8 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC15.54■□□□□ 0.08
NpcdF8VQB8 Gm13875-201ENSMUST00000120162 282 ntBASIC15.54■□□□□ 0.08
NpcdF8VQB8 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NpcdF8VQB8 Gm22121-201ENSMUST00000175148 54 ntBASIC15.54■□□□□ 0.08
NpcdF8VQB8 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC15.54■□□□□ 0.08
NpcdF8VQB8 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NpcdF8VQB8 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC15.54■□□□□ 0.08
NpcdF8VQB8 Gm8285-201ENSMUST00000208293 759 ntBASIC15.54■□□□□ 0.08
NpcdF8VQB8 Gm7600-201ENSMUST00000209657 785 ntBASIC15.54■□□□□ 0.08
NpcdF8VQB8 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC15.54■□□□□ 0.08
NpcdF8VQB8 AC159819.2-201ENSMUST00000216151 342 ntBASIC15.54■□□□□ 0.08
NpcdF8VQB8 Dhrs4-202ENSMUST00000226168 828 ntBASIC15.54■□□□□ 0.08
NpcdF8VQB8 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
NpcdF8VQB8 AC113031.8-201ENSMUST00000227856 631 ntBASIC15.54■□□□□ 0.08
NpcdF8VQB8 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
NpcdF8VQB8 Gm10179-201ENSMUST00000086233 688 ntBASIC15.54■□□□□ 0.08
NpcdF8VQB8 Gm9947-201ENSMUST00000067599 2920 ntBASIC15.54■□□□□ 0.08
NpcdF8VQB8 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NpcdF8VQB8 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
NpcdF8VQB8 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NpcdF8VQB8 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NpcdF8VQB8 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NpcdF8VQB8 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NpcdF8VQB8 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NpcdF8VQB8 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms