Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Atf6F6VAN0 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC13.3□□□□□ -0.28
Atf6F6VAN0 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Atf6F6VAN0 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Atf6F6VAN0 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Atf6F6VAN0 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Atf6F6VAN0 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Atf6F6VAN0 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC13.3□□□□□ -0.28
Atf6F6VAN0 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Atf6F6VAN0 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Atf6F6VAN0 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Atf6F6VAN0 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Atf6F6VAN0 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Atf6F6VAN0 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Atf6F6VAN0 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Atf6F6VAN0 Gm18558-201ENSMUST00000186253 1214 ntBASIC13.3□□□□□ -0.28
Atf6F6VAN0 Gm28693-202ENSMUST00000190758 331 ntBASIC13.3□□□□□ -0.28
Atf6F6VAN0 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC13.3□□□□□ -0.28
Atf6F6VAN0 Ighv5-13-201ENSMUST00000193550 290 ntBASIC13.3□□□□□ -0.28
Atf6F6VAN0 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC13.3□□□□□ -0.28
Atf6F6VAN0 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC13.3□□□□□ -0.28
Atf6F6VAN0 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Atf6F6VAN0 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Atf6F6VAN0 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Atf6F6VAN0 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Atf6F6VAN0 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Atf6F6VAN0 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Atf6F6VAN0 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Atf6F6VAN0 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Atf6F6VAN0 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC13.3□□□□□ -0.28
Atf6F6VAN0 AC101945.2-201ENSMUST00000227886 1377 ntBASIC13.3□□□□□ -0.28
Atf6F6VAN0 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Atf6F6VAN0 Gm26616-202ENSMUST00000195676 3107 ntBASIC13.3□□□□□ -0.28
Atf6F6VAN0 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Atf6F6VAN0 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Atf6F6VAN0 Gm9816-201ENSMUST00000122292 1414 ntBASIC13.3□□□□□ -0.28
Atf6F6VAN0 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Atf6F6VAN0 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Atf6F6VAN0 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Atf6F6VAN0 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Atf6F6VAN0 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Atf6F6VAN0 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Atf6F6VAN0 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Atf6F6VAN0 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Atf6F6VAN0 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Atf6F6VAN0 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Atf6F6VAN0 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Atf6F6VAN0 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC13.29□□□□□ -0.28
Atf6F6VAN0 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC13.29□□□□□ -0.28
Atf6F6VAN0 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Atf6F6VAN0 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Atf6F6VAN0 Mir686-201ENSMUST00000102174 109 ntBASIC13.29□□□□□ -0.28
Atf6F6VAN0 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Atf6F6VAN0 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
Atf6F6VAN0 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC13.29□□□□□ -0.28
Atf6F6VAN0 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC13.29□□□□□ -0.28
Atf6F6VAN0 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Atf6F6VAN0 Gm12490-201ENSMUST00000120255 560 ntBASIC13.29□□□□□ -0.28
Atf6F6VAN0 Gm12539-201ENSMUST00000121549 1098 ntBASIC13.29□□□□□ -0.28
Atf6F6VAN0 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC13.29□□□□□ -0.28
Atf6F6VAN0 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Atf6F6VAN0 Gm6244-201ENSMUST00000178732 841 ntBASIC13.29□□□□□ -0.28
Atf6F6VAN0 Gm9124-201ENSMUST00000191789 1092 ntBASIC13.29□□□□□ -0.28
Atf6F6VAN0 Gm9113-201ENSMUST00000192510 1018 ntBASIC13.29□□□□□ -0.28
Atf6F6VAN0 Gm9131-201ENSMUST00000193557 1089 ntBASIC13.29□□□□□ -0.28
Atf6F6VAN0 Gm9121-201ENSMUST00000193749 1071 ntBASIC13.29□□□□□ -0.28
Atf6F6VAN0 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC13.29□□□□□ -0.28
Atf6F6VAN0 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC13.29□□□□□ -0.28
Atf6F6VAN0 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC13.29□□□□□ -0.28
Atf6F6VAN0 AC093022.5-201ENSMUST00000226841 1079 ntBASIC13.29□□□□□ -0.28
Atf6F6VAN0 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Atf6F6VAN0 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Atf6F6VAN0 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Atf6F6VAN0 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Atf6F6VAN0 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Atf6F6VAN0 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Atf6F6VAN0 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Atf6F6VAN0 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Atf6F6VAN0 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Atf6F6VAN0 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Atf6F6VAN0 Gm38049-201ENSMUST00000195698 1372 ntBASIC13.29□□□□□ -0.28
Atf6F6VAN0 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Atf6F6VAN0 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC13.29□□□□□ -0.28
Atf6F6VAN0 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Atf6F6VAN0 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Atf6F6VAN0 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Atf6F6VAN0 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Atf6F6VAN0 AC241621.2-201ENSMUST00000223991 2151 ntBASIC13.28□□□□□ -0.28
Atf6F6VAN0 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Atf6F6VAN0 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Atf6F6VAN0 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Atf6F6VAN0 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Atf6F6VAN0 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Atf6F6VAN0 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Atf6F6VAN0 Ntrk2-204ENSMUST00000224259 3049 ntBASIC13.28□□□□□ -0.28
Atf6F6VAN0 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Atf6F6VAN0 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Atf6F6VAN0 Gm10305-201ENSMUST00000195331 2475 ntBASIC13.28□□□□□ -0.28
Atf6F6VAN0 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Atf6F6VAN0 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms