Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC15.21■□□□□ 0.02
Pcdhb9E9Q5G2 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Pcdhb9E9Q5G2 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Pcdhb9E9Q5G2 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Pcdhb9E9Q5G2 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Pcdhb9E9Q5G2 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Pcdhb9E9Q5G2 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC15.2■□□□□ 0.02
Pcdhb9E9Q5G2 Gm8617-201ENSMUST00000118796 2222 ntBASIC15.2■□□□□ 0.02
Pcdhb9E9Q5G2 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb9E9Q5G2 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Pcdhb9E9Q5G2 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb9E9Q5G2 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Pcdhb9E9Q5G2 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb9E9Q5G2 Gm6023-201ENSMUST00000118217 606 ntBASIC15.2■□□□□ 0.02
Pcdhb9E9Q5G2 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC15.2■□□□□ 0.02
Pcdhb9E9Q5G2 Gm13316-201ENSMUST00000140537 691 ntBASIC15.2■□□□□ 0.02
Pcdhb9E9Q5G2 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb9E9Q5G2 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb9E9Q5G2 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC15.2■□□□□ 0.02
Pcdhb9E9Q5G2 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC15.2■□□□□ 0.02
Pcdhb9E9Q5G2 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb9E9Q5G2 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC15.2■□□□□ 0.02
Pcdhb9E9Q5G2 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC15.2■□□□□ 0.02
Pcdhb9E9Q5G2 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb9E9Q5G2 Olfr284-202ENSMUST00000206647 966 ntBASIC15.2■□□□□ 0.02
Pcdhb9E9Q5G2 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb9E9Q5G2 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC15.2■□□□□ 0.02
Pcdhb9E9Q5G2 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb9E9Q5G2 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC15.2■□□□□ 0.02
Pcdhb9E9Q5G2 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC15.2■□□□□ 0.02
Pcdhb9E9Q5G2 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC15.2■□□□□ 0.02
Pcdhb9E9Q5G2 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Pcdhb9E9Q5G2 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb9E9Q5G2 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
Pcdhb9E9Q5G2 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb9E9Q5G2 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb9E9Q5G2 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Pcdhb9E9Q5G2 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb9E9Q5G2 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb9E9Q5G2 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb9E9Q5G2 Gm45643-201ENSMUST00000211364 1484 ntBASIC15.2■□□□□ 0.02
Pcdhb9E9Q5G2 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb9E9Q5G2 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb9E9Q5G2 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb9E9Q5G2 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Pcdhb9E9Q5G2 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb9E9Q5G2 Gm11661-201ENSMUST00000121761 1327 ntBASIC15.19■□□□□ 0.02
Pcdhb9E9Q5G2 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb9E9Q5G2 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb9E9Q5G2 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb9E9Q5G2 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb9E9Q5G2 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb9E9Q5G2 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC15.19■□□□□ 0.02
Pcdhb9E9Q5G2 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC15.19■□□□□ 0.02
Pcdhb9E9Q5G2 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC15.19■□□□□ 0.02
Pcdhb9E9Q5G2 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC15.19■□□□□ 0.02
Pcdhb9E9Q5G2 Mir8109-201ENSMUST00000184375 117 ntBASIC15.19■□□□□ 0.02
Pcdhb9E9Q5G2 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC15.19■□□□□ 0.02
Pcdhb9E9Q5G2 AC159896.2-201ENSMUST00000214753 269 ntBASIC15.19■□□□□ 0.02
Pcdhb9E9Q5G2 AC154319.1-201ENSMUST00000216330 312 ntBASIC15.19■□□□□ 0.02
Pcdhb9E9Q5G2 AL589735.1-201ENSMUST00000224353 270 ntBASIC15.19■□□□□ 0.02
Pcdhb9E9Q5G2 Gm24526-201ENSMUST00000082921 158 ntBASIC15.19■□□□□ 0.02
Pcdhb9E9Q5G2 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb9E9Q5G2 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb9E9Q5G2 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC15.19■□□□□ 0.02
Pcdhb9E9Q5G2 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb9E9Q5G2 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb9E9Q5G2 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC15.19■□□□□ 0.02
Pcdhb9E9Q5G2 Gm3756-201ENSMUST00000169182 1355 ntBASIC15.19■□□□□ 0.02
Pcdhb9E9Q5G2 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb9E9Q5G2 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb9E9Q5G2 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb9E9Q5G2 Daam2-202ENSMUST00000224595 1926 ntBASIC15.19■□□□□ 0.02
Pcdhb9E9Q5G2 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb9E9Q5G2 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb9E9Q5G2 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Pcdhb9E9Q5G2 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb9E9Q5G2 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb9E9Q5G2 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb9E9Q5G2 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb9E9Q5G2 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb9E9Q5G2 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb9E9Q5G2 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb9E9Q5G2 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb9E9Q5G2 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Pcdhb9E9Q5G2 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb9E9Q5G2 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb9E9Q5G2 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC15.18■□□□□ 0.02
Pcdhb9E9Q5G2 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC15.18■□□□□ 0.02
Pcdhb9E9Q5G2 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb9E9Q5G2 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb9E9Q5G2 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb9E9Q5G2 Mir1247-201ENSMUST00000116706 82 ntBASIC15.18■□□□□ 0.02
Pcdhb9E9Q5G2 Gm15198-201ENSMUST00000117283 177 ntBASIC15.18■□□□□ 0.02
Pcdhb9E9Q5G2 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb9E9Q5G2 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC15.18■□□□□ 0.02
Pcdhb9E9Q5G2 Gm8801-201ENSMUST00000173255 1064 ntBASIC15.18■□□□□ 0.02
Pcdhb9E9Q5G2 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC15.18■□□□□ 0.02
Pcdhb9E9Q5G2 Gm6007-201ENSMUST00000208170 823 ntBASIC15.18■□□□□ 0.02
Pcdhb9E9Q5G2 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 66 ms