Protein–RNA interactions for Protein: B4XVP9

Phf11c, PHD finger protein 11C, mousemouse

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phf11cB4XVP9 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Phf11cB4XVP9 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Phf11cB4XVP9 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Phf11cB4XVP9 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Phf11cB4XVP9 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Phf11cB4XVP9 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Phf11cB4XVP9 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Phf11cB4XVP9 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Phf11cB4XVP9 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Phf11cB4XVP9 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Phf11cB4XVP9 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.26□□□□□ -0.45
Phf11cB4XVP9 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.26□□□□□ -0.45
Phf11cB4XVP9 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Phf11cB4XVP9 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.26□□□□□ -0.45
Phf11cB4XVP9 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.26□□□□□ -0.45
Phf11cB4XVP9 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Phf11cB4XVP9 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.26□□□□□ -0.45
Phf11cB4XVP9 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC12.26□□□□□ -0.45
Phf11cB4XVP9 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Phf11cB4XVP9 Gm24694-201ENSMUST00000180054 110 ntBASIC12.26□□□□□ -0.45
Phf11cB4XVP9 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Phf11cB4XVP9 Mir8102-201ENSMUST00000184148 139 ntBASIC12.26□□□□□ -0.45
Phf11cB4XVP9 Gm27663-201ENSMUST00000184839 110 ntBASIC12.26□□□□□ -0.45
Phf11cB4XVP9 Gm42612-201ENSMUST00000197986 623 ntBASIC12.26□□□□□ -0.45
Phf11cB4XVP9 Gm43170-201ENSMUST00000199827 612 ntBASIC12.26□□□□□ -0.45
Phf11cB4XVP9 AC132467.2-202ENSMUST00000227726 559 ntBASIC12.26□□□□□ -0.45
Phf11cB4XVP9 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Phf11cB4XVP9 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Phf11cB4XVP9 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC12.26□□□□□ -0.45
Phf11cB4XVP9 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Phf11cB4XVP9 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Phf11cB4XVP9 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Phf11cB4XVP9 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Phf11cB4XVP9 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Phf11cB4XVP9 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Phf11cB4XVP9 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Phf11cB4XVP9 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12.26□□□□□ -0.45
Phf11cB4XVP9 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Phf11cB4XVP9 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Phf11cB4XVP9 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Phf11cB4XVP9 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Phf11cB4XVP9 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.26□□□□□ -0.45
Phf11cB4XVP9 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Phf11cB4XVP9 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Phf11cB4XVP9 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.26□□□□□ -0.45
Phf11cB4XVP9 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Phf11cB4XVP9 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Phf11cB4XVP9 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Phf11cB4XVP9 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Phf11cB4XVP9 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Phf11cB4XVP9 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Phf11cB4XVP9 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Phf11cB4XVP9 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Phf11cB4XVP9 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Phf11cB4XVP9 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Phf11cB4XVP9 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
Phf11cB4XVP9 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Phf11cB4XVP9 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Phf11cB4XVP9 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Phf11cB4XVP9 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Phf11cB4XVP9 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Phf11cB4XVP9 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Phf11cB4XVP9 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Phf11cB4XVP9 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Phf11cB4XVP9 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Phf11cB4XVP9 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.25□□□□□ -0.45
Phf11cB4XVP9 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Phf11cB4XVP9 Mir7684-201ENSMUST00000183858 60 ntBASIC12.25□□□□□ -0.45
Phf11cB4XVP9 Gm45195-201ENSMUST00000205597 1008 ntBASIC12.25□□□□□ -0.45
Phf11cB4XVP9 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Phf11cB4XVP9 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC12.25□□□□□ -0.45
Phf11cB4XVP9 AC192088.1-201ENSMUST00000227561 301 ntBASIC12.25□□□□□ -0.45
Phf11cB4XVP9 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Phf11cB4XVP9 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Phf11cB4XVP9 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Phf11cB4XVP9 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Phf11cB4XVP9 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Phf11cB4XVP9 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Phf11cB4XVP9 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Phf11cB4XVP9 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Phf11cB4XVP9 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Phf11cB4XVP9 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Phf11cB4XVP9 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Phf11cB4XVP9 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.25□□□□□ -0.45
Phf11cB4XVP9 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Phf11cB4XVP9 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Phf11cB4XVP9 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Phf11cB4XVP9 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.25□□□□□ -0.45
Phf11cB4XVP9 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Phf11cB4XVP9 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
Phf11cB4XVP9 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
Phf11cB4XVP9 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Phf11cB4XVP9 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Phf11cB4XVP9 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Phf11cB4XVP9 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Phf11cB4XVP9 Gm22189-201ENSMUST00000103822 86 ntBASIC12.24□□□□□ -0.45
Phf11cB4XVP9 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Phf11cB4XVP9 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Phf11cB4XVP9 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Phf11cB4XVP9 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 78.5 ms