Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC13.05□□□□□ -0.32
Col4a6B1AVK5 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col4a6B1AVK5 Gm9785-201ENSMUST00000062642 1006 ntBASIC13.05□□□□□ -0.32
Col4a6B1AVK5 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Col4a6B1AVK5 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Col4a6B1AVK5 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col4a6B1AVK5 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC13.05□□□□□ -0.32
Col4a6B1AVK5 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col4a6B1AVK5 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Col4a6B1AVK5 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col4a6B1AVK5 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col4a6B1AVK5 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Col4a6B1AVK5 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col4a6B1AVK5 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Col4a6B1AVK5 AC171277.1-201ENSMUST00000216902 1441 ntBASIC13.04□□□□□ -0.32
Col4a6B1AVK5 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Col4a6B1AVK5 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Col4a6B1AVK5 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.04□□□□□ -0.32
Col4a6B1AVK5 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Col4a6B1AVK5 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col4a6B1AVK5 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col4a6B1AVK5 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Col4a6B1AVK5 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Col4a6B1AVK5 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC13.04□□□□□ -0.32
Col4a6B1AVK5 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col4a6B1AVK5 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
Col4a6B1AVK5 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Col4a6B1AVK5 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col4a6B1AVK5 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Col4a6B1AVK5 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Col4a6B1AVK5 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC13.04□□□□□ -0.32
Col4a6B1AVK5 Gm13047-201ENSMUST00000117116 815 ntBASIC13.04□□□□□ -0.32
Col4a6B1AVK5 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC13.04□□□□□ -0.32
Col4a6B1AVK5 Gm12029-201ENSMUST00000120073 832 ntBASIC13.04□□□□□ -0.32
Col4a6B1AVK5 Gm15595-201ENSMUST00000120840 961 ntBASIC13.04□□□□□ -0.32
Col4a6B1AVK5 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC13.04□□□□□ -0.32
Col4a6B1AVK5 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC13.04□□□□□ -0.32
Col4a6B1AVK5 Gm15881-201ENSMUST00000148792 942 ntBASIC13.04□□□□□ -0.32
Col4a6B1AVK5 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
Col4a6B1AVK5 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
Col4a6B1AVK5 Gm807-202ENSMUST00000224929 408 ntBASIC13.04□□□□□ -0.32
Col4a6B1AVK5 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col4a6B1AVK5 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Col4a6B1AVK5 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Col4a6B1AVK5 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col4a6B1AVK5 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col4a6B1AVK5 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col4a6B1AVK5 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col4a6B1AVK5 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col4a6B1AVK5 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col4a6B1AVK5 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col4a6B1AVK5 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col4a6B1AVK5 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col4a6B1AVK5 Gm7049-201ENSMUST00000223520 1712 ntBASIC13.04□□□□□ -0.32
Col4a6B1AVK5 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col4a6B1AVK5 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col4a6B1AVK5 Gm28719-201ENSMUST00000187779 1757 ntBASIC13.04□□□□□ -0.32
Col4a6B1AVK5 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Col4a6B1AVK5 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Col4a6B1AVK5 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Col4a6B1AVK5 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col4a6B1AVK5 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col4a6B1AVK5 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Col4a6B1AVK5 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Col4a6B1AVK5 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col4a6B1AVK5 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Col4a6B1AVK5 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Col4a6B1AVK5 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC13.03□□□□□ -0.32
Col4a6B1AVK5 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC13.03□□□□□ -0.32
Col4a6B1AVK5 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC13.03□□□□□ -0.32
Col4a6B1AVK5 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Col4a6B1AVK5 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC13.03□□□□□ -0.32
Col4a6B1AVK5 AC132901.1-201ENSMUST00000224345 508 ntBASIC13.03□□□□□ -0.32
Col4a6B1AVK5 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col4a6B1AVK5 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Col4a6B1AVK5 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC13.03□□□□□ -0.32
Col4a6B1AVK5 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC13.03□□□□□ -0.32
Col4a6B1AVK5 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC13.03□□□□□ -0.32
Col4a6B1AVK5 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col4a6B1AVK5 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC13.03□□□□□ -0.32
Col4a6B1AVK5 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Col4a6B1AVK5 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Col4a6B1AVK5 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col4a6B1AVK5 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col4a6B1AVK5 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col4a6B1AVK5 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Col4a6B1AVK5 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Col4a6B1AVK5 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Col4a6B1AVK5 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Col4a6B1AVK5 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col4a6B1AVK5 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col4a6B1AVK5 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col4a6B1AVK5 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC13.03□□□□□ -0.32
Col4a6B1AVK5 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col4a6B1AVK5 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col4a6B1AVK5 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col4a6B1AVK5 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Col4a6B1AVK5 Gm14460-201ENSMUST00000121511 639 ntBASIC13.02□□□□□ -0.32
Col4a6B1AVK5 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC13.02□□□□□ -0.32
Col4a6B1AVK5 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC13.02□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms