Protein–RNA interactions for Protein: A8DUK4

Hbb-bs, Beta-globin, mousemouse

Predictions only

Length 147 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbb-bsA8DUK4 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Hbb-bsA8DUK4 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Hbb-bsA8DUK4 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Hbb-bsA8DUK4 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC9.07□□□□□ -0.96
Hbb-bsA8DUK4 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC9.07□□□□□ -0.96
Hbb-bsA8DUK4 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC9.07□□□□□ -0.96
Hbb-bsA8DUK4 AC160338.1-201ENSMUST00000214232 705 ntBASIC9.07□□□□□ -0.96
Hbb-bsA8DUK4 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC9.07□□□□□ -0.96
Hbb-bsA8DUK4 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Hbb-bsA8DUK4 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Hbb-bsA8DUK4 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Hbb-bsA8DUK4 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Hbb-bsA8DUK4 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Hbb-bsA8DUK4 AC124577.2-201ENSMUST00000217413 2420 ntBASIC9.07□□□□□ -0.96
Hbb-bsA8DUK4 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Hbb-bsA8DUK4 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Hbb-bsA8DUK4 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Hbb-bsA8DUK4 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Hbb-bsA8DUK4 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Hbb-bsA8DUK4 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Hbb-bsA8DUK4 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Hbb-bsA8DUK4 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Hbb-bsA8DUK4 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Hbb-bsA8DUK4 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Hbb-bsA8DUK4 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Hbb-bsA8DUK4 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Hbb-bsA8DUK4 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Hbb-bsA8DUK4 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC9.07□□□□□ -0.96
Hbb-bsA8DUK4 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC9.07□□□□□ -0.96
Hbb-bsA8DUK4 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Hbb-bsA8DUK4 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Hbb-bsA8DUK4 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Hbb-bsA8DUK4 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Hbb-bsA8DUK4 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Hbb-bsA8DUK4 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Hbb-bsA8DUK4 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Hbb-bsA8DUK4 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Hbb-bsA8DUK4 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
Hbb-bsA8DUK4 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC9.06□□□□□ -0.96
Hbb-bsA8DUK4 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Hbb-bsA8DUK4 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Hbb-bsA8DUK4 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Hbb-bsA8DUK4 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Hbb-bsA8DUK4 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Hbb-bsA8DUK4 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Hbb-bsA8DUK4 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Hbb-bsA8DUK4 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Hbb-bsA8DUK4 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Hbb-bsA8DUK4 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Hbb-bsA8DUK4 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
Hbb-bsA8DUK4 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Hbb-bsA8DUK4 Gm15770-201ENSMUST00000117498 584 ntBASIC9.06□□□□□ -0.96
Hbb-bsA8DUK4 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC9.06□□□□□ -0.96
Hbb-bsA8DUK4 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Hbb-bsA8DUK4 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Hbb-bsA8DUK4 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Hbb-bsA8DUK4 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC9.06□□□□□ -0.96
Hbb-bsA8DUK4 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC9.06□□□□□ -0.96
Hbb-bsA8DUK4 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Hbb-bsA8DUK4 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
Hbb-bsA8DUK4 AC159301.1-201ENSMUST00000225130 1182 ntBASIC9.06□□□□□ -0.96
Hbb-bsA8DUK4 AC169036.1-201ENSMUST00000227994 296 ntBASIC9.06□□□□□ -0.96
Hbb-bsA8DUK4 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Hbb-bsA8DUK4 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Hbb-bsA8DUK4 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Hbb-bsA8DUK4 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
Hbb-bsA8DUK4 Gm7461-201ENSMUST00000058918 827 ntBASIC9.06□□□□□ -0.96
Hbb-bsA8DUK4 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Hbb-bsA8DUK4 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
Hbb-bsA8DUK4 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Hbb-bsA8DUK4 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Hbb-bsA8DUK4 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC9.06□□□□□ -0.96
Hbb-bsA8DUK4 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC9.06□□□□□ -0.96
Hbb-bsA8DUK4 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Hbb-bsA8DUK4 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Hbb-bsA8DUK4 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC9.06□□□□□ -0.96
Hbb-bsA8DUK4 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Hbb-bsA8DUK4 BC043934-202ENSMUST00000185694 2356 ntBASIC9.06□□□□□ -0.96
Hbb-bsA8DUK4 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Hbb-bsA8DUK4 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
Hbb-bsA8DUK4 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
Hbb-bsA8DUK4 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Hbb-bsA8DUK4 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
Hbb-bsA8DUK4 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC9.05□□□□□ -0.96
Hbb-bsA8DUK4 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Hbb-bsA8DUK4 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Hbb-bsA8DUK4 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Hbb-bsA8DUK4 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Hbb-bsA8DUK4 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Hbb-bsA8DUK4 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
Hbb-bsA8DUK4 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Hbb-bsA8DUK4 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Hbb-bsA8DUK4 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Hbb-bsA8DUK4 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Hbb-bsA8DUK4 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Hbb-bsA8DUK4 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Hbb-bsA8DUK4 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC9.05□□□□□ -0.96
Hbb-bsA8DUK4 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Hbb-bsA8DUK4 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Hbb-bsA8DUK4 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms