Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Gm6180-201ENSMUST00000065243 498 ntBASIC9.43□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC9.43□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC9.43□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC9.43□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav9n-2A0A0G2JDP3 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC9.42□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC9.42□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav9n-2A0A0G2JDP3 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC9.42□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Mir692-1-201ENSMUST00000102263 109 ntBASIC9.42□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC9.42□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC9.42□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC9.42□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC9.42□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Gm27701-201ENSMUST00000184498 110 ntBASIC9.42□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Gm28911-201ENSMUST00000188837 117 ntBASIC9.42□□□□□ -0.9
Trav9n-2A0A0G2JDP3 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Trav9n-2A0A0G2JDP3 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC9.42□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Trav9n-2A0A0G2JDP3 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC9.42□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Gm38671-201ENSMUST00000200573 130 ntBASIC9.42□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav9n-2A0A0G2JDP3 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC9.42□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC9.42□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Gm9908-201ENSMUST00000211534 448 ntBASIC9.42□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav9n-2A0A0G2JDP3 AC125117.1-201ENSMUST00000228121 468 ntBASIC9.42□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC9.42□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC9.42□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Gm44851-201ENSMUST00000205735 2309 ntBASIC9.42□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav9n-2A0A0G2JDP3 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC9.41□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC9.41□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Gm9115-201ENSMUST00000120192 1348 ntBASIC9.41□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms