Protein–RNA interactions for Protein: A0A0A6YWI9

Ighv1-11, Immunoglobulin heavy variable V1-11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-11A0A0A6YWI9 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Ighv1-11A0A0A6YWI9 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Ighv1-11A0A0A6YWI9 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Ighv1-11A0A0A6YWI9 Hist1h2al-201ENSMUST00000091708 339 ntBASIC9.17□□□□□ -0.94
Ighv1-11A0A0A6YWI9 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Ighv1-11A0A0A6YWI9 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC9.17□□□□□ -0.94
Ighv1-11A0A0A6YWI9 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Ighv1-11A0A0A6YWI9 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Ighv1-11A0A0A6YWI9 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Ighv1-11A0A0A6YWI9 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC9.17□□□□□ -0.94
Ighv1-11A0A0A6YWI9 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Ighv1-11A0A0A6YWI9 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC9.17□□□□□ -0.94
Ighv1-11A0A0A6YWI9 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Ighv1-11A0A0A6YWI9 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Ighv1-11A0A0A6YWI9 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Ighv1-11A0A0A6YWI9 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Ighv1-11A0A0A6YWI9 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Ighv1-11A0A0A6YWI9 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Ighv1-11A0A0A6YWI9 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC9.17□□□□□ -0.94
Ighv1-11A0A0A6YWI9 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Ighv1-11A0A0A6YWI9 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
Ighv1-11A0A0A6YWI9 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ighv1-11A0A0A6YWI9 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC9.16□□□□□ -0.94
Ighv1-11A0A0A6YWI9 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ighv1-11A0A0A6YWI9 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ighv1-11A0A0A6YWI9 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ighv1-11A0A0A6YWI9 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Ighv1-11A0A0A6YWI9 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ighv1-11A0A0A6YWI9 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ighv1-11A0A0A6YWI9 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ighv1-11A0A0A6YWI9 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ighv1-11A0A0A6YWI9 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC9.16□□□□□ -0.94
Ighv1-11A0A0A6YWI9 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ighv1-11A0A0A6YWI9 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ighv1-11A0A0A6YWI9 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ighv1-11A0A0A6YWI9 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ighv1-11A0A0A6YWI9 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ighv1-11A0A0A6YWI9 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ighv1-11A0A0A6YWI9 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ighv1-11A0A0A6YWI9 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Ighv1-11A0A0A6YWI9 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Ighv1-11A0A0A6YWI9 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ighv1-11A0A0A6YWI9 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
Ighv1-11A0A0A6YWI9 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ighv1-11A0A0A6YWI9 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ighv1-11A0A0A6YWI9 Gm6263-201ENSMUST00000120029 1342 ntBASIC9.16□□□□□ -0.94
Ighv1-11A0A0A6YWI9 Syt7-204ENSMUST00000223586 1344 ntBASIC9.16□□□□□ -0.94
Ighv1-11A0A0A6YWI9 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ighv1-11A0A0A6YWI9 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ighv1-11A0A0A6YWI9 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ighv1-11A0A0A6YWI9 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ighv1-11A0A0A6YWI9 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Ighv1-11A0A0A6YWI9 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC9.16□□□□□ -0.94
Ighv1-11A0A0A6YWI9 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC9.16□□□□□ -0.94
Ighv1-11A0A0A6YWI9 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC9.16□□□□□ -0.94
Ighv1-11A0A0A6YWI9 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ighv1-11A0A0A6YWI9 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC9.16□□□□□ -0.94
Ighv1-11A0A0A6YWI9 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC9.16□□□□□ -0.94
Ighv1-11A0A0A6YWI9 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Ighv1-11A0A0A6YWI9 Gm43094-201ENSMUST00000196549 921 ntBASIC9.16□□□□□ -0.94
Ighv1-11A0A0A6YWI9 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC9.16□□□□□ -0.94
Ighv1-11A0A0A6YWI9 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Ighv1-11A0A0A6YWI9 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ighv1-11A0A0A6YWI9 AC154276.1-201ENSMUST00000228874 1299 ntBASIC9.16□□□□□ -0.94
Ighv1-11A0A0A6YWI9 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ighv1-11A0A0A6YWI9 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ighv1-11A0A0A6YWI9 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC9.16□□□□□ -0.94
Ighv1-11A0A0A6YWI9 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ighv1-11A0A0A6YWI9 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC9.16□□□□□ -0.94
Ighv1-11A0A0A6YWI9 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC9.16□□□□□ -0.94
Ighv1-11A0A0A6YWI9 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ighv1-11A0A0A6YWI9 Gm37472-201ENSMUST00000192342 4052 ntBASIC9.16□□□□□ -0.94
Ighv1-11A0A0A6YWI9 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC9.16□□□□□ -0.94
Ighv1-11A0A0A6YWI9 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Ighv1-11A0A0A6YWI9 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
Ighv1-11A0A0A6YWI9 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Ighv1-11A0A0A6YWI9 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Ighv1-11A0A0A6YWI9 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Ighv1-11A0A0A6YWI9 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Ighv1-11A0A0A6YWI9 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Ighv1-11A0A0A6YWI9 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Ighv1-11A0A0A6YWI9 Gm3365-201ENSMUST00000216296 1480 ntBASIC9.15□□□□□ -0.94
Ighv1-11A0A0A6YWI9 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Ighv1-11A0A0A6YWI9 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Ighv1-11A0A0A6YWI9 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Ighv1-11A0A0A6YWI9 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Ighv1-11A0A0A6YWI9 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Ighv1-11A0A0A6YWI9 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Ighv1-11A0A0A6YWI9 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
Ighv1-11A0A0A6YWI9 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Ighv1-11A0A0A6YWI9 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Ighv1-11A0A0A6YWI9 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Ighv1-11A0A0A6YWI9 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Ighv1-11A0A0A6YWI9 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Ighv1-11A0A0A6YWI9 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Ighv1-11A0A0A6YWI9 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Ighv1-11A0A0A6YWI9 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Ighv1-11A0A0A6YWI9 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Ighv1-11A0A0A6YWI9 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Ighv1-11A0A0A6YWI9 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC9.15□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms