Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav18A0A075B656 Gm37660-201ENSMUST00000192754 1732 ntBASIC10.62□□□□□ -0.71
Trav18A0A075B656 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav18A0A075B656 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav18A0A075B656 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav18A0A075B656 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trav18A0A075B656 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav18A0A075B656 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC10.62□□□□□ -0.71
Trav18A0A075B656 Ldha-ps-201ENSMUST00000119390 995 ntBASIC10.62□□□□□ -0.71
Trav18A0A075B656 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC10.62□□□□□ -0.71
Trav18A0A075B656 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC10.62□□□□□ -0.71
Trav18A0A075B656 Gm20949-201ENSMUST00000206478 952 ntBASIC10.62□□□□□ -0.71
Trav18A0A075B656 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC10.62□□□□□ -0.71
Trav18A0A075B656 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav18A0A075B656 Abhd6-203ENSMUST00000225234 1958 ntBASIC10.62□□□□□ -0.71
Trav18A0A075B656 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav18A0A075B656 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav18A0A075B656 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav18A0A075B656 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav18A0A075B656 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav18A0A075B656 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav18A0A075B656 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trav18A0A075B656 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav18A0A075B656 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC10.61□□□□□ -0.71
Trav18A0A075B656 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav18A0A075B656 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav18A0A075B656 Gm37324-201ENSMUST00000194500 4504 ntBASIC10.61□□□□□ -0.71
Trav18A0A075B656 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav18A0A075B656 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav18A0A075B656 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav18A0A075B656 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC10.61□□□□□ -0.71
Trav18A0A075B656 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav18A0A075B656 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav18A0A075B656 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav18A0A075B656 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav18A0A075B656 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav18A0A075B656 Gm43463-201ENSMUST00000195967 1803 ntBASIC10.61□□□□□ -0.71
Trav18A0A075B656 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC10.61□□□□□ -0.71
Trav18A0A075B656 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav18A0A075B656 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav18A0A075B656 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav18A0A075B656 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav18A0A075B656 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav18A0A075B656 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC10.61□□□□□ -0.71
Trav18A0A075B656 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC10.61□□□□□ -0.71
Trav18A0A075B656 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav18A0A075B656 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav18A0A075B656 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav18A0A075B656 Gm44855-201ENSMUST00000205725 362 ntBASIC10.61□□□□□ -0.71
Trav18A0A075B656 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC10.61□□□□□ -0.71
Trav18A0A075B656 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC10.61□□□□□ -0.71
Trav18A0A075B656 Gm19220-201ENSMUST00000222682 803 ntBASIC10.61□□□□□ -0.71
Trav18A0A075B656 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC10.61□□□□□ -0.71
Trav18A0A075B656 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav18A0A075B656 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav18A0A075B656 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav18A0A075B656 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav18A0A075B656 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav18A0A075B656 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav18A0A075B656 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Trav18A0A075B656 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav18A0A075B656 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav18A0A075B656 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav18A0A075B656 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav18A0A075B656 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav18A0A075B656 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC10.61□□□□□ -0.71
Trav18A0A075B656 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav18A0A075B656 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav18A0A075B656 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav18A0A075B656 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Trav18A0A075B656 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC10.61□□□□□ -0.71
Trav18A0A075B656 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav18A0A075B656 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Trav18A0A075B656 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav18A0A075B656 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Trav18A0A075B656 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav18A0A075B656 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Trav18A0A075B656 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav18A0A075B656 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Trav18A0A075B656 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC10.6□□□□□ -0.71
Trav18A0A075B656 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav18A0A075B656 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav18A0A075B656 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav18A0A075B656 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav18A0A075B656 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav18A0A075B656 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav18A0A075B656 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav18A0A075B656 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav18A0A075B656 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav18A0A075B656 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav18A0A075B656 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav18A0A075B656 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC10.6□□□□□ -0.71
Trav18A0A075B656 Gm15371-201ENSMUST00000117057 784 ntBASIC10.6□□□□□ -0.71
Trav18A0A075B656 Gm12341-201ENSMUST00000119724 503 ntBASIC10.6□□□□□ -0.71
Trav18A0A075B656 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
Trav18A0A075B656 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav18A0A075B656 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC10.6□□□□□ -0.71
Trav18A0A075B656 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav18A0A075B656 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav18A0A075B656 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms