Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trav8-1A0A075B641 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trav8-1A0A075B641 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC9.26□□□□□ -0.93
Trav8-1A0A075B641 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trav8-1A0A075B641 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trav8-1A0A075B641 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC9.26□□□□□ -0.93
Trav8-1A0A075B641 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trav8-1A0A075B641 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trav8-1A0A075B641 Gm6157-201ENSMUST00000199935 1897 ntBASIC9.26□□□□□ -0.93
Trav8-1A0A075B641 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trav8-1A0A075B641 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Trav8-1A0A075B641 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Trav8-1A0A075B641 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC9.26□□□□□ -0.93
Trav8-1A0A075B641 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC9.26□□□□□ -0.93
Trav8-1A0A075B641 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
Trav8-1A0A075B641 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
Trav8-1A0A075B641 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC9.26□□□□□ -0.93
Trav8-1A0A075B641 Gm38114-201ENSMUST00000191877 1232 ntBASIC9.26□□□□□ -0.93
Trav8-1A0A075B641 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC9.26□□□□□ -0.93
Trav8-1A0A075B641 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC9.26□□□□□ -0.93
Trav8-1A0A075B641 AC132467.2-202ENSMUST00000227726 559 ntBASIC9.26□□□□□ -0.93
Trav8-1A0A075B641 Gm7461-201ENSMUST00000058918 827 ntBASIC9.26□□□□□ -0.93
Trav8-1A0A075B641 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
Trav8-1A0A075B641 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trav8-1A0A075B641 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
Trav8-1A0A075B641 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Trav8-1A0A075B641 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Trav8-1A0A075B641 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC9.26□□□□□ -0.93
Trav8-1A0A075B641 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trav8-1A0A075B641 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC9.26□□□□□ -0.93
Trav8-1A0A075B641 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trav8-1A0A075B641 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
Trav8-1A0A075B641 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trav8-1A0A075B641 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC9.26□□□□□ -0.93
Trav8-1A0A075B641 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trav8-1A0A075B641 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trav8-1A0A075B641 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC9.26□□□□□ -0.93
Trav8-1A0A075B641 Gm45266-201ENSMUST00000210111 2173 ntBASIC9.26□□□□□ -0.93
Trav8-1A0A075B641 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Trav8-1A0A075B641 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Trav8-1A0A075B641 AC211878.3-201ENSMUST00000222629 2018 ntBASIC9.26□□□□□ -0.93
Trav8-1A0A075B641 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
Trav8-1A0A075B641 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trav8-1A0A075B641 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trav8-1A0A075B641 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trav8-1A0A075B641 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Trav8-1A0A075B641 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC9.25□□□□□ -0.93
Trav8-1A0A075B641 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trav8-1A0A075B641 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Trav8-1A0A075B641 AC114543.1-201ENSMUST00000226451 1558 ntBASIC9.25□□□□□ -0.93
Trav8-1A0A075B641 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Trav8-1A0A075B641 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trav8-1A0A075B641 Zkscan3-207ENSMUST00000223831 2101 ntBASIC9.25□□□□□ -0.93
Trav8-1A0A075B641 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trav8-1A0A075B641 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Trav8-1A0A075B641 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trav8-1A0A075B641 AC159196.2-201ENSMUST00000224082 1622 ntBASIC9.25□□□□□ -0.93
Trav8-1A0A075B641 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trav8-1A0A075B641 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trav8-1A0A075B641 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC9.25□□□□□ -0.93
Trav8-1A0A075B641 Gm12350-201ENSMUST00000121208 462 ntBASIC9.25□□□□□ -0.93
Trav8-1A0A075B641 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC9.25□□□□□ -0.93
Trav8-1A0A075B641 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Trav8-1A0A075B641 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC9.25□□□□□ -0.93
Trav8-1A0A075B641 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC9.25□□□□□ -0.93
Trav8-1A0A075B641 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trav8-1A0A075B641 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trav8-1A0A075B641 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trav8-1A0A075B641 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC9.25□□□□□ -0.93
Trav8-1A0A075B641 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Trav8-1A0A075B641 AC153506.1-201ENSMUST00000218768 2915 ntBASIC9.25□□□□□ -0.93
Trav8-1A0A075B641 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trav8-1A0A075B641 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trav8-1A0A075B641 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Trav8-1A0A075B641 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
Trav8-1A0A075B641 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trav8-1A0A075B641 Gm43045-201ENSMUST00000198725 2095 ntBASIC9.25□□□□□ -0.93
Trav8-1A0A075B641 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Trav8-1A0A075B641 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trav8-1A0A075B641 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Trav8-1A0A075B641 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trav8-1A0A075B641 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trav8-1A0A075B641 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trav8-1A0A075B641 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Trav8-1A0A075B641 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Trav8-1A0A075B641 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Trav8-1A0A075B641 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Trav8-1A0A075B641 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trav8-1A0A075B641 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC9.25□□□□□ -0.93
Trav8-1A0A075B641 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Trav8-1A0A075B641 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trav8-1A0A075B641 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Trav8-1A0A075B641 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav8-1A0A075B641 Gm37368-201ENSMUST00000193173 3212 ntBASIC9.24□□□□□ -0.93
Trav8-1A0A075B641 AC123834.1-201ENSMUST00000225346 2043 ntBASIC9.24□□□□□ -0.93
Trav8-1A0A075B641 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Trav8-1A0A075B641 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Trav8-1A0A075B641 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav8-1A0A075B641 AC124751.1-201ENSMUST00000222716 1408 ntBASIC9.24□□□□□ -0.93
Trav8-1A0A075B641 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms