Protein–RNA interactions for Protein: Q9Z0Z3

Skp2, S-phase kinase-associated protein 2, mousemouse

Predictions only

Length 424 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Skp2Q9Z0Z3 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Skp2Q9Z0Z3 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Skp2Q9Z0Z3 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
Skp2Q9Z0Z3 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Skp2Q9Z0Z3 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Skp2Q9Z0Z3 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Skp2Q9Z0Z3 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC11.81□□□□□ -0.52
Skp2Q9Z0Z3 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Skp2Q9Z0Z3 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Skp2Q9Z0Z3 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Skp2Q9Z0Z3 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Skp2Q9Z0Z3 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Skp2Q9Z0Z3 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Skp2Q9Z0Z3 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Skp2Q9Z0Z3 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC11.81□□□□□ -0.52
Skp2Q9Z0Z3 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Skp2Q9Z0Z3 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Skp2Q9Z0Z3 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Skp2Q9Z0Z3 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.8□□□□□ -0.52
Skp2Q9Z0Z3 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Skp2Q9Z0Z3 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Skp2Q9Z0Z3 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Skp2Q9Z0Z3 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Skp2Q9Z0Z3 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Skp2Q9Z0Z3 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Skp2Q9Z0Z3 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Skp2Q9Z0Z3 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Skp2Q9Z0Z3 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC11.8□□□□□ -0.52
Skp2Q9Z0Z3 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Skp2Q9Z0Z3 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Skp2Q9Z0Z3 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Skp2Q9Z0Z3 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Skp2Q9Z0Z3 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC11.8□□□□□ -0.52
Skp2Q9Z0Z3 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Skp2Q9Z0Z3 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Skp2Q9Z0Z3 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC11.8□□□□□ -0.52
Skp2Q9Z0Z3 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
Skp2Q9Z0Z3 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Skp2Q9Z0Z3 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Skp2Q9Z0Z3 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Skp2Q9Z0Z3 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Skp2Q9Z0Z3 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC11.8□□□□□ -0.52
Skp2Q9Z0Z3 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC11.8□□□□□ -0.52
Skp2Q9Z0Z3 AC134335.2-201ENSMUST00000227660 440 ntBASIC11.8□□□□□ -0.52
Skp2Q9Z0Z3 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Skp2Q9Z0Z3 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Skp2Q9Z0Z3 Gm5867-201ENSMUST00000063197 592 ntBASIC11.8□□□□□ -0.52
Skp2Q9Z0Z3 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
Skp2Q9Z0Z3 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Skp2Q9Z0Z3 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Skp2Q9Z0Z3 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Skp2Q9Z0Z3 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Skp2Q9Z0Z3 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Skp2Q9Z0Z3 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Skp2Q9Z0Z3 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Skp2Q9Z0Z3 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Skp2Q9Z0Z3 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Skp2Q9Z0Z3 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Skp2Q9Z0Z3 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC11.8□□□□□ -0.52
Skp2Q9Z0Z3 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Skp2Q9Z0Z3 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Skp2Q9Z0Z3 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Skp2Q9Z0Z3 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Skp2Q9Z0Z3 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC11.8□□□□□ -0.52
Skp2Q9Z0Z3 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Skp2Q9Z0Z3 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Skp2Q9Z0Z3 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Skp2Q9Z0Z3 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Skp2Q9Z0Z3 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Skp2Q9Z0Z3 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Skp2Q9Z0Z3 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Skp2Q9Z0Z3 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Skp2Q9Z0Z3 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Skp2Q9Z0Z3 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Skp2Q9Z0Z3 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Skp2Q9Z0Z3 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC11.79□□□□□ -0.52
Skp2Q9Z0Z3 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC11.79□□□□□ -0.52
Skp2Q9Z0Z3 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Skp2Q9Z0Z3 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Skp2Q9Z0Z3 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC11.79□□□□□ -0.52
Skp2Q9Z0Z3 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Skp2Q9Z0Z3 Gm11400-201ENSMUST00000120853 1214 ntBASIC11.79□□□□□ -0.52
Skp2Q9Z0Z3 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Skp2Q9Z0Z3 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC11.79□□□□□ -0.52
Skp2Q9Z0Z3 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC11.79□□□□□ -0.52
Skp2Q9Z0Z3 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Skp2Q9Z0Z3 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC11.79□□□□□ -0.52
Skp2Q9Z0Z3 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Skp2Q9Z0Z3 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Skp2Q9Z0Z3 Gm31326-201ENSMUST00000191856 1048 ntBASIC11.79□□□□□ -0.52
Skp2Q9Z0Z3 Gm44872-201ENSMUST00000207864 420 ntBASIC11.79□□□□□ -0.52
Skp2Q9Z0Z3 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC11.79□□□□□ -0.52
Skp2Q9Z0Z3 AC155258.1-201ENSMUST00000219303 253 ntBASIC11.79□□□□□ -0.52
Skp2Q9Z0Z3 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Skp2Q9Z0Z3 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Skp2Q9Z0Z3 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Skp2Q9Z0Z3 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Skp2Q9Z0Z3 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Skp2Q9Z0Z3 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Skp2Q9Z0Z3 AC241621.2-201ENSMUST00000223991 2151 ntBASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms