Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
Cldn9Q9Z0S7 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
Cldn9Q9Z0S7 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.48□□□□□ -0.41
Cldn9Q9Z0S7 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cldn9Q9Z0S7 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cldn9Q9Z0S7 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cldn9Q9Z0S7 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.48□□□□□ -0.41
Cldn9Q9Z0S7 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.48□□□□□ -0.41
Cldn9Q9Z0S7 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cldn9Q9Z0S7 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cldn9Q9Z0S7 Gm45384-201ENSMUST00000210451 277 ntBASIC12.48□□□□□ -0.41
Cldn9Q9Z0S7 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cldn9Q9Z0S7 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cldn9Q9Z0S7 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cldn9Q9Z0S7 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.48□□□□□ -0.41
Cldn9Q9Z0S7 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cldn9Q9Z0S7 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.48□□□□□ -0.41
Cldn9Q9Z0S7 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cldn9Q9Z0S7 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cldn9Q9Z0S7 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Cldn9Q9Z0S7 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cldn9Q9Z0S7 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Cldn9Q9Z0S7 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Cldn9Q9Z0S7 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cldn9Q9Z0S7 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Cldn9Q9Z0S7 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.47□□□□□ -0.41
Cldn9Q9Z0S7 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cldn9Q9Z0S7 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cldn9Q9Z0S7 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cldn9Q9Z0S7 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.47□□□□□ -0.41
Cldn9Q9Z0S7 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cldn9Q9Z0S7 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.47□□□□□ -0.41
Cldn9Q9Z0S7 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cldn9Q9Z0S7 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cldn9Q9Z0S7 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cldn9Q9Z0S7 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Cldn9Q9Z0S7 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cldn9Q9Z0S7 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cldn9Q9Z0S7 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cldn9Q9Z0S7 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Cldn9Q9Z0S7 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.47□□□□□ -0.41
Cldn9Q9Z0S7 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cldn9Q9Z0S7 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cldn9Q9Z0S7 Gm11618-201ENSMUST00000117946 267 ntBASIC12.47□□□□□ -0.41
Cldn9Q9Z0S7 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cldn9Q9Z0S7 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.47□□□□□ -0.41
Cldn9Q9Z0S7 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC12.47□□□□□ -0.41
Cldn9Q9Z0S7 Gm28693-202ENSMUST00000190758 331 ntBASIC12.47□□□□□ -0.41
Cldn9Q9Z0S7 Gm6745-201ENSMUST00000199216 526 ntBASIC12.47□□□□□ -0.41
Cldn9Q9Z0S7 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC12.47□□□□□ -0.41
Cldn9Q9Z0S7 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.47□□□□□ -0.41
Cldn9Q9Z0S7 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cldn9Q9Z0S7 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cldn9Q9Z0S7 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cldn9Q9Z0S7 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cldn9Q9Z0S7 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cldn9Q9Z0S7 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
Cldn9Q9Z0S7 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cldn9Q9Z0S7 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.47□□□□□ -0.41
Cldn9Q9Z0S7 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cldn9Q9Z0S7 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.47□□□□□ -0.41
Cldn9Q9Z0S7 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.47□□□□□ -0.41
Cldn9Q9Z0S7 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cldn9Q9Z0S7 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cldn9Q9Z0S7 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Cldn9Q9Z0S7 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cldn9Q9Z0S7 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cldn9Q9Z0S7 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cldn9Q9Z0S7 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cldn9Q9Z0S7 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cldn9Q9Z0S7 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cldn9Q9Z0S7 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cldn9Q9Z0S7 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Cldn9Q9Z0S7 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cldn9Q9Z0S7 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cldn9Q9Z0S7 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Cldn9Q9Z0S7 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Cldn9Q9Z0S7 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Cldn9Q9Z0S7 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cldn9Q9Z0S7 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
Cldn9Q9Z0S7 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.46□□□□□ -0.41
Cldn9Q9Z0S7 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cldn9Q9Z0S7 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cldn9Q9Z0S7 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.46□□□□□ -0.41
Cldn9Q9Z0S7 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cldn9Q9Z0S7 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.46□□□□□ -0.41
Cldn9Q9Z0S7 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC12.46□□□□□ -0.41
Cldn9Q9Z0S7 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cldn9Q9Z0S7 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.46□□□□□ -0.41
Cldn9Q9Z0S7 Gm9124-201ENSMUST00000191789 1092 ntBASIC12.46□□□□□ -0.41
Cldn9Q9Z0S7 Gm9113-201ENSMUST00000192510 1018 ntBASIC12.46□□□□□ -0.41
Cldn9Q9Z0S7 Gm9131-201ENSMUST00000193557 1089 ntBASIC12.46□□□□□ -0.41
Cldn9Q9Z0S7 Gm9121-201ENSMUST00000193749 1071 ntBASIC12.46□□□□□ -0.41
Cldn9Q9Z0S7 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC12.46□□□□□ -0.41
Cldn9Q9Z0S7 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.46□□□□□ -0.41
Cldn9Q9Z0S7 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC12.46□□□□□ -0.41
Cldn9Q9Z0S7 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.46□□□□□ -0.41
Cldn9Q9Z0S7 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.46□□□□□ -0.41
Cldn9Q9Z0S7 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cldn9Q9Z0S7 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms