Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ClcnkaQ9WUB7 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
ClcnkaQ9WUB7 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
ClcnkaQ9WUB7 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ClcnkaQ9WUB7 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ClcnkaQ9WUB7 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
ClcnkaQ9WUB7 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ClcnkaQ9WUB7 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
ClcnkaQ9WUB7 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC11.98□□□□□ -0.49
ClcnkaQ9WUB7 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ClcnkaQ9WUB7 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ClcnkaQ9WUB7 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ClcnkaQ9WUB7 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
ClcnkaQ9WUB7 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
ClcnkaQ9WUB7 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC11.98□□□□□ -0.49
ClcnkaQ9WUB7 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
ClcnkaQ9WUB7 Gm38671-201ENSMUST00000200573 130 ntBASIC11.98□□□□□ -0.49
ClcnkaQ9WUB7 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ClcnkaQ9WUB7 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
ClcnkaQ9WUB7 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
ClcnkaQ9WUB7 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ClcnkaQ9WUB7 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
ClcnkaQ9WUB7 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
ClcnkaQ9WUB7 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ClcnkaQ9WUB7 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ClcnkaQ9WUB7 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC11.98□□□□□ -0.49
ClcnkaQ9WUB7 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
ClcnkaQ9WUB7 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ClcnkaQ9WUB7 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ClcnkaQ9WUB7 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
ClcnkaQ9WUB7 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
ClcnkaQ9WUB7 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
ClcnkaQ9WUB7 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
ClcnkaQ9WUB7 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
ClcnkaQ9WUB7 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC11.98□□□□□ -0.49
ClcnkaQ9WUB7 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
ClcnkaQ9WUB7 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ClcnkaQ9WUB7 Gm5466-201ENSMUST00000119395 1890 ntBASIC11.97□□□□□ -0.49
ClcnkaQ9WUB7 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ClcnkaQ9WUB7 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
ClcnkaQ9WUB7 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
ClcnkaQ9WUB7 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ClcnkaQ9WUB7 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ClcnkaQ9WUB7 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ClcnkaQ9WUB7 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
ClcnkaQ9WUB7 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
ClcnkaQ9WUB7 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ClcnkaQ9WUB7 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
ClcnkaQ9WUB7 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
ClcnkaQ9WUB7 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
ClcnkaQ9WUB7 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ClcnkaQ9WUB7 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
ClcnkaQ9WUB7 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
ClcnkaQ9WUB7 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
ClcnkaQ9WUB7 Gm12960-201ENSMUST00000120017 1066 ntBASIC11.97□□□□□ -0.49
ClcnkaQ9WUB7 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC11.97□□□□□ -0.49
ClcnkaQ9WUB7 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
ClcnkaQ9WUB7 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC11.97□□□□□ -0.49
ClcnkaQ9WUB7 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC11.97□□□□□ -0.49
ClcnkaQ9WUB7 Gm7063-201ENSMUST00000186840 981 ntBASIC11.97□□□□□ -0.49
ClcnkaQ9WUB7 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
ClcnkaQ9WUB7 Gm7287-201ENSMUST00000205267 602 ntBASIC11.97□□□□□ -0.49
ClcnkaQ9WUB7 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC11.97□□□□□ -0.49
ClcnkaQ9WUB7 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC11.97□□□□□ -0.49
ClcnkaQ9WUB7 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ClcnkaQ9WUB7 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ClcnkaQ9WUB7 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ClcnkaQ9WUB7 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ClcnkaQ9WUB7 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ClcnkaQ9WUB7 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
ClcnkaQ9WUB7 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ClcnkaQ9WUB7 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
ClcnkaQ9WUB7 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
ClcnkaQ9WUB7 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ClcnkaQ9WUB7 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC11.97□□□□□ -0.49
ClcnkaQ9WUB7 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ClcnkaQ9WUB7 Gm43463-201ENSMUST00000195967 1803 ntBASIC11.97□□□□□ -0.49
ClcnkaQ9WUB7 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
ClcnkaQ9WUB7 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ClcnkaQ9WUB7 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ClcnkaQ9WUB7 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
ClcnkaQ9WUB7 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ClcnkaQ9WUB7 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ClcnkaQ9WUB7 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
ClcnkaQ9WUB7 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ClcnkaQ9WUB7 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ClcnkaQ9WUB7 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
ClcnkaQ9WUB7 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
ClcnkaQ9WUB7 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC11.96□□□□□ -0.49
ClcnkaQ9WUB7 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
ClcnkaQ9WUB7 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
ClcnkaQ9WUB7 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
ClcnkaQ9WUB7 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
ClcnkaQ9WUB7 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
ClcnkaQ9WUB7 Gm38385-201ENSMUST00000194454 2351 ntBASIC11.96□□□□□ -0.49
ClcnkaQ9WUB7 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC11.96□□□□□ -0.49
ClcnkaQ9WUB7 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
ClcnkaQ9WUB7 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
ClcnkaQ9WUB7 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
ClcnkaQ9WUB7 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms