Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Scn8aQ9WTU3 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.96□□□□□ -0.34
Scn8aQ9WTU3 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.96□□□□□ -0.34
Scn8aQ9WTU3 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Scn8aQ9WTU3 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Scn8aQ9WTU3 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Scn8aQ9WTU3 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.34
Scn8aQ9WTU3 Gm19994-201ENSMUST00000217086 586 ntBASIC12.96□□□□□ -0.34
Scn8aQ9WTU3 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Scn8aQ9WTU3 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Scn8aQ9WTU3 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Scn8aQ9WTU3 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Scn8aQ9WTU3 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Scn8aQ9WTU3 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Scn8aQ9WTU3 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn8aQ9WTU3 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn8aQ9WTU3 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn8aQ9WTU3 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn8aQ9WTU3 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC12.95□□□□□ -0.34
Scn8aQ9WTU3 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn8aQ9WTU3 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Scn8aQ9WTU3 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Scn8aQ9WTU3 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.95□□□□□ -0.34
Scn8aQ9WTU3 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn8aQ9WTU3 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Scn8aQ9WTU3 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn8aQ9WTU3 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn8aQ9WTU3 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn8aQ9WTU3 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Scn8aQ9WTU3 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn8aQ9WTU3 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Scn8aQ9WTU3 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn8aQ9WTU3 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Scn8aQ9WTU3 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC12.95□□□□□ -0.34
Scn8aQ9WTU3 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC12.95□□□□□ -0.34
Scn8aQ9WTU3 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC12.95□□□□□ -0.34
Scn8aQ9WTU3 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn8aQ9WTU3 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn8aQ9WTU3 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn8aQ9WTU3 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn8aQ9WTU3 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Scn8aQ9WTU3 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn8aQ9WTU3 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn8aQ9WTU3 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Scn8aQ9WTU3 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn8aQ9WTU3 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC12.95□□□□□ -0.34
Scn8aQ9WTU3 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn8aQ9WTU3 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn8aQ9WTU3 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn8aQ9WTU3 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn8aQ9WTU3 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn8aQ9WTU3 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn8aQ9WTU3 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scn8aQ9WTU3 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scn8aQ9WTU3 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Scn8aQ9WTU3 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.94□□□□□ -0.34
Scn8aQ9WTU3 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scn8aQ9WTU3 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Scn8aQ9WTU3 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
Scn8aQ9WTU3 Gm11531-201ENSMUST00000117614 555 ntBASIC12.94□□□□□ -0.34
Scn8aQ9WTU3 Gm12749-201ENSMUST00000122138 1159 ntBASIC12.94□□□□□ -0.34
Scn8aQ9WTU3 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Scn8aQ9WTU3 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Scn8aQ9WTU3 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Scn8aQ9WTU3 Gm8885-201ENSMUST00000189382 598 ntBASIC12.94□□□□□ -0.34
Scn8aQ9WTU3 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC12.94□□□□□ -0.34
Scn8aQ9WTU3 Gm38000-201ENSMUST00000192390 1215 ntBASIC12.94□□□□□ -0.34
Scn8aQ9WTU3 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scn8aQ9WTU3 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Scn8aQ9WTU3 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scn8aQ9WTU3 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scn8aQ9WTU3 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Scn8aQ9WTU3 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC12.94□□□□□ -0.34
Scn8aQ9WTU3 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scn8aQ9WTU3 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Scn8aQ9WTU3 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.94□□□□□ -0.34
Scn8aQ9WTU3 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scn8aQ9WTU3 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Scn8aQ9WTU3 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scn8aQ9WTU3 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12.94□□□□□ -0.34
Scn8aQ9WTU3 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Scn8aQ9WTU3 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Scn8aQ9WTU3 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Scn8aQ9WTU3 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scn8aQ9WTU3 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scn8aQ9WTU3 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scn8aQ9WTU3 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Scn8aQ9WTU3 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.94□□□□□ -0.34
Scn8aQ9WTU3 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Scn8aQ9WTU3 Gm27243-201ENSMUST00000183964 521 ntBASIC12.94□□□□□ -0.34
Scn8aQ9WTU3 Gm44405-201ENSMUST00000198952 126 ntBASIC12.94□□□□□ -0.34
Scn8aQ9WTU3 AC163667.3-201ENSMUST00000225774 222 ntBASIC12.94□□□□□ -0.34
Scn8aQ9WTU3 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scn8aQ9WTU3 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Scn8aQ9WTU3 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Scn8aQ9WTU3 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Scn8aQ9WTU3 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scn8aQ9WTU3 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Scn8aQ9WTU3 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Scn8aQ9WTU3 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms