Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Prpf40aQ9R1C7 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf40aQ9R1C7 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf40aQ9R1C7 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf40aQ9R1C7 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf40aQ9R1C7 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf40aQ9R1C7 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC14.29□□□□□ -0.12
Prpf40aQ9R1C7 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf40aQ9R1C7 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf40aQ9R1C7 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Prpf40aQ9R1C7 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf40aQ9R1C7 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf40aQ9R1C7 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Prpf40aQ9R1C7 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf40aQ9R1C7 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf40aQ9R1C7 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf40aQ9R1C7 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf40aQ9R1C7 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf40aQ9R1C7 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf40aQ9R1C7 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC14.29□□□□□ -0.12
Prpf40aQ9R1C7 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf40aQ9R1C7 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC14.29□□□□□ -0.12
Prpf40aQ9R1C7 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf40aQ9R1C7 CT573086.1-201ENSMUST00000227202 1074 ntBASIC14.29□□□□□ -0.12
Prpf40aQ9R1C7 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf40aQ9R1C7 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf40aQ9R1C7 Gm18630-201ENSMUST00000222109 1397 ntBASIC14.29□□□□□ -0.12
Prpf40aQ9R1C7 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf40aQ9R1C7 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC14.29□□□□□ -0.12
Prpf40aQ9R1C7 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf40aQ9R1C7 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf40aQ9R1C7 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Prpf40aQ9R1C7 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf40aQ9R1C7 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf40aQ9R1C7 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf40aQ9R1C7 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf40aQ9R1C7 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf40aQ9R1C7 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf40aQ9R1C7 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Prpf40aQ9R1C7 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf40aQ9R1C7 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf40aQ9R1C7 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf40aQ9R1C7 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf40aQ9R1C7 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf40aQ9R1C7 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf40aQ9R1C7 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf40aQ9R1C7 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Prpf40aQ9R1C7 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf40aQ9R1C7 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Prpf40aQ9R1C7 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Prpf40aQ9R1C7 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf40aQ9R1C7 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf40aQ9R1C7 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf40aQ9R1C7 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf40aQ9R1C7 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf40aQ9R1C7 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf40aQ9R1C7 Gm11814-201ENSMUST00000119515 929 ntBASIC14.28□□□□□ -0.12
Prpf40aQ9R1C7 Gm6161-201ENSMUST00000121942 1102 ntBASIC14.28□□□□□ -0.12
Prpf40aQ9R1C7 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC14.28□□□□□ -0.12
Prpf40aQ9R1C7 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC14.28□□□□□ -0.12
Prpf40aQ9R1C7 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
Prpf40aQ9R1C7 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Prpf40aQ9R1C7 Gm6254-201ENSMUST00000168178 1072 ntBASIC14.28□□□□□ -0.12
Prpf40aQ9R1C7 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf40aQ9R1C7 Gm6153-201ENSMUST00000172004 1058 ntBASIC14.28□□□□□ -0.12
Prpf40aQ9R1C7 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC14.28□□□□□ -0.12
Prpf40aQ9R1C7 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Prpf40aQ9R1C7 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Prpf40aQ9R1C7 Gm27486-201ENSMUST00000184923 80 ntBASIC14.28□□□□□ -0.12
Prpf40aQ9R1C7 Gm5641-202ENSMUST00000198699 1080 ntBASIC14.28□□□□□ -0.12
Prpf40aQ9R1C7 Gm44851-201ENSMUST00000205735 2309 ntBASIC14.28□□□□□ -0.12
Prpf40aQ9R1C7 AC151895.1-201ENSMUST00000219025 1742 ntBASIC14.28□□□□□ -0.12
Prpf40aQ9R1C7 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Prpf40aQ9R1C7 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf40aQ9R1C7 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf40aQ9R1C7 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf40aQ9R1C7 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Prpf40aQ9R1C7 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf40aQ9R1C7 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Prpf40aQ9R1C7 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Prpf40aQ9R1C7 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf40aQ9R1C7 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
Prpf40aQ9R1C7 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Prpf40aQ9R1C7 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Prpf40aQ9R1C7 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Prpf40aQ9R1C7 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC14.27□□□□□ -0.12
Prpf40aQ9R1C7 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Prpf40aQ9R1C7 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
Prpf40aQ9R1C7 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Prpf40aQ9R1C7 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Prpf40aQ9R1C7 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Prpf40aQ9R1C7 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Prpf40aQ9R1C7 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Prpf40aQ9R1C7 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC14.27□□□□□ -0.12
Prpf40aQ9R1C7 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Prpf40aQ9R1C7 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Prpf40aQ9R1C7 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Prpf40aQ9R1C7 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC14.27□□□□□ -0.12
Prpf40aQ9R1C7 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Prpf40aQ9R1C7 Gm5303-201ENSMUST00000117943 1252 ntBASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms