Protein–RNA interactions for Protein: Q9R0A5

Nek3, Serine/threonine-protein kinase Nek3, mousemouse

Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek3Q9R0A5 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nek3Q9R0A5 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC14.19□□□□□ -0.14
Nek3Q9R0A5 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC14.19□□□□□ -0.14
Nek3Q9R0A5 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Nek3Q9R0A5 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nek3Q9R0A5 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Nek3Q9R0A5 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC14.19□□□□□ -0.14
Nek3Q9R0A5 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Nek3Q9R0A5 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Nek3Q9R0A5 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nek3Q9R0A5 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nek3Q9R0A5 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nek3Q9R0A5 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nek3Q9R0A5 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nek3Q9R0A5 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nek3Q9R0A5 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nek3Q9R0A5 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nek3Q9R0A5 Gm10728-201ENSMUST00000194292 1829 ntBASIC14.18□□□□□ -0.14
Nek3Q9R0A5 Gm5053-201ENSMUST00000208361 1678 ntBASIC14.18□□□□□ -0.14
Nek3Q9R0A5 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nek3Q9R0A5 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nek3Q9R0A5 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Nek3Q9R0A5 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Nek3Q9R0A5 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC14.18□□□□□ -0.14
Nek3Q9R0A5 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nek3Q9R0A5 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nek3Q9R0A5 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nek3Q9R0A5 Gm9630-201ENSMUST00000178304 885 ntBASIC14.18□□□□□ -0.14
Nek3Q9R0A5 Gm44064-201ENSMUST00000204964 1087 ntBASIC14.18□□□□□ -0.14
Nek3Q9R0A5 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nek3Q9R0A5 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nek3Q9R0A5 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nek3Q9R0A5 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nek3Q9R0A5 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nek3Q9R0A5 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nek3Q9R0A5 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Nek3Q9R0A5 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC14.18□□□□□ -0.14
Nek3Q9R0A5 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nek3Q9R0A5 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nek3Q9R0A5 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nek3Q9R0A5 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nek3Q9R0A5 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nek3Q9R0A5 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nek3Q9R0A5 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nek3Q9R0A5 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nek3Q9R0A5 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nek3Q9R0A5 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC14.17□□□□□ -0.14
Nek3Q9R0A5 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC14.17□□□□□ -0.14
Nek3Q9R0A5 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nek3Q9R0A5 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nek3Q9R0A5 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC14.17□□□□□ -0.14
Nek3Q9R0A5 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nek3Q9R0A5 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC14.17□□□□□ -0.14
Nek3Q9R0A5 Gm15371-201ENSMUST00000117057 784 ntBASIC14.17□□□□□ -0.14
Nek3Q9R0A5 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nek3Q9R0A5 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nek3Q9R0A5 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Nek3Q9R0A5 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nek3Q9R0A5 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC14.17□□□□□ -0.14
Nek3Q9R0A5 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Nek3Q9R0A5 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nek3Q9R0A5 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nek3Q9R0A5 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Nek3Q9R0A5 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Nek3Q9R0A5 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nek3Q9R0A5 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC14.17□□□□□ -0.14
Nek3Q9R0A5 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nek3Q9R0A5 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nek3Q9R0A5 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nek3Q9R0A5 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nek3Q9R0A5 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nek3Q9R0A5 AC166574.4-201ENSMUST00000227165 1937 ntBASIC14.17□□□□□ -0.14
Nek3Q9R0A5 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nek3Q9R0A5 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nek3Q9R0A5 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nek3Q9R0A5 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nek3Q9R0A5 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nek3Q9R0A5 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC14.16□□□□□ -0.14
Nek3Q9R0A5 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Nek3Q9R0A5 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nek3Q9R0A5 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nek3Q9R0A5 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nek3Q9R0A5 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nek3Q9R0A5 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nek3Q9R0A5 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC14.16□□□□□ -0.14
Nek3Q9R0A5 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nek3Q9R0A5 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nek3Q9R0A5 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC14.16□□□□□ -0.14
Nek3Q9R0A5 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Nek3Q9R0A5 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Nek3Q9R0A5 Ldha-ps-201ENSMUST00000119390 995 ntBASIC14.16□□□□□ -0.14
Nek3Q9R0A5 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nek3Q9R0A5 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Nek3Q9R0A5 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Nek3Q9R0A5 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC14.16□□□□□ -0.14
Nek3Q9R0A5 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC14.16□□□□□ -0.14
Nek3Q9R0A5 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC14.16□□□□□ -0.14
Nek3Q9R0A5 Gm44397-201ENSMUST00000195950 113 ntBASIC14.16□□□□□ -0.14
Nek3Q9R0A5 Ighv8-10-201ENSMUST00000199579 358 ntBASIC14.16□□□□□ -0.14
Nek3Q9R0A5 Gm6983-201ENSMUST00000214912 628 ntBASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms