Protein–RNA interactions for Protein: Q9R049

Amfr, E3 ubiquitin-protein ligase AMFR, mousemouse

Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AmfrQ9R049 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
AmfrQ9R049 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC14.52□□□□□ -0.08
AmfrQ9R049 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
AmfrQ9R049 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
AmfrQ9R049 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
AmfrQ9R049 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
AmfrQ9R049 AC114008.2-201ENSMUST00000227699 1347 ntBASIC14.52□□□□□ -0.08
AmfrQ9R049 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC14.52□□□□□ -0.08
AmfrQ9R049 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
AmfrQ9R049 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC14.52□□□□□ -0.09
AmfrQ9R049 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
AmfrQ9R049 Gm10156-201ENSMUST00000122364 462 ntBASIC14.52□□□□□ -0.09
AmfrQ9R049 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
AmfrQ9R049 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
AmfrQ9R049 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
AmfrQ9R049 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC14.52□□□□□ -0.09
AmfrQ9R049 Gm6266-201ENSMUST00000203844 806 ntBASIC14.52□□□□□ -0.09
AmfrQ9R049 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC14.52□□□□□ -0.09
AmfrQ9R049 Gm8598-201ENSMUST00000221184 836 ntBASIC14.52□□□□□ -0.09
AmfrQ9R049 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
AmfrQ9R049 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
AmfrQ9R049 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
AmfrQ9R049 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
AmfrQ9R049 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
AmfrQ9R049 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
AmfrQ9R049 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
AmfrQ9R049 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
AmfrQ9R049 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
AmfrQ9R049 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
AmfrQ9R049 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
AmfrQ9R049 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
AmfrQ9R049 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
AmfrQ9R049 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
AmfrQ9R049 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC14.51□□□□□ -0.09
AmfrQ9R049 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
AmfrQ9R049 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
AmfrQ9R049 Gm9816-201ENSMUST00000122292 1414 ntBASIC14.51□□□□□ -0.09
AmfrQ9R049 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
AmfrQ9R049 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
AmfrQ9R049 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
AmfrQ9R049 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
AmfrQ9R049 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
AmfrQ9R049 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
AmfrQ9R049 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
AmfrQ9R049 Gm12390-201ENSMUST00000117897 397 ntBASIC14.51□□□□□ -0.09
AmfrQ9R049 Gm11400-201ENSMUST00000120853 1214 ntBASIC14.51□□□□□ -0.09
AmfrQ9R049 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
AmfrQ9R049 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC14.51□□□□□ -0.09
AmfrQ9R049 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
AmfrQ9R049 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
AmfrQ9R049 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC14.51□□□□□ -0.09
AmfrQ9R049 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC14.51□□□□□ -0.09
AmfrQ9R049 Gm27486-201ENSMUST00000184923 80 ntBASIC14.51□□□□□ -0.09
AmfrQ9R049 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC14.51□□□□□ -0.09
AmfrQ9R049 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
AmfrQ9R049 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC14.51□□□□□ -0.09
AmfrQ9R049 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
AmfrQ9R049 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
AmfrQ9R049 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
AmfrQ9R049 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
AmfrQ9R049 Gm25857-201ENSMUST00000082788 129 ntBASIC14.51□□□□□ -0.09
AmfrQ9R049 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
AmfrQ9R049 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
AmfrQ9R049 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
AmfrQ9R049 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
AmfrQ9R049 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
AmfrQ9R049 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
AmfrQ9R049 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
AmfrQ9R049 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC14.51□□□□□ -0.09
AmfrQ9R049 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
AmfrQ9R049 Gm27194-201ENSMUST00000175753 2936 ntBASIC14.51□□□□□ -0.09
AmfrQ9R049 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
AmfrQ9R049 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
AmfrQ9R049 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
AmfrQ9R049 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
AmfrQ9R049 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
AmfrQ9R049 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
AmfrQ9R049 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC14.51□□□□□ -0.09
AmfrQ9R049 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
AmfrQ9R049 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
AmfrQ9R049 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
AmfrQ9R049 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
AmfrQ9R049 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
AmfrQ9R049 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
AmfrQ9R049 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
AmfrQ9R049 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
AmfrQ9R049 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
AmfrQ9R049 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
AmfrQ9R049 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
AmfrQ9R049 Gm6161-201ENSMUST00000121942 1102 ntBASIC14.5□□□□□ -0.09
AmfrQ9R049 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC14.5□□□□□ -0.09
AmfrQ9R049 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
AmfrQ9R049 Gm6254-201ENSMUST00000168178 1072 ntBASIC14.5□□□□□ -0.09
AmfrQ9R049 Gm6153-201ENSMUST00000172004 1058 ntBASIC14.5□□□□□ -0.09
AmfrQ9R049 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
AmfrQ9R049 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
AmfrQ9R049 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
AmfrQ9R049 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC14.5□□□□□ -0.09
AmfrQ9R049 Gm5641-202ENSMUST00000198699 1080 ntBASIC14.5□□□□□ -0.09
AmfrQ9R049 Gm38671-201ENSMUST00000200573 130 ntBASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms