Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Gm4271-201ENSMUST00000174444 973 ntBASIC11.79□□□□□ -0.52
Clcf1Q9QZM3 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC11.79□□□□□ -0.52
Clcf1Q9QZM3 Gm43630-201ENSMUST00000201550 776 ntBASIC11.79□□□□□ -0.52
Clcf1Q9QZM3 Gm44064-201ENSMUST00000204964 1087 ntBASIC11.79□□□□□ -0.52
Clcf1Q9QZM3 Gm40466-201ENSMUST00000212174 422 ntBASIC11.79□□□□□ -0.52
Clcf1Q9QZM3 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC11.79□□□□□ -0.52
Clcf1Q9QZM3 AC140451.2-201ENSMUST00000228030 664 ntBASIC11.79□□□□□ -0.52
Clcf1Q9QZM3 Gm16372-201ENSMUST00000073088 450 ntBASIC11.79□□□□□ -0.52
Clcf1Q9QZM3 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Clcf1Q9QZM3 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Clcf1Q9QZM3 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Clcf1Q9QZM3 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Clcf1Q9QZM3 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC11.79□□□□□ -0.52
Clcf1Q9QZM3 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC11.79□□□□□ -0.52
Clcf1Q9QZM3 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Clcf1Q9QZM3 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
Clcf1Q9QZM3 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Clcf1Q9QZM3 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Clcf1Q9QZM3 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clcf1Q9QZM3 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Clcf1Q9QZM3 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Clcf1Q9QZM3 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clcf1Q9QZM3 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC11.78□□□□□ -0.52
Clcf1Q9QZM3 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC11.78□□□□□ -0.52
Clcf1Q9QZM3 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clcf1Q9QZM3 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clcf1Q9QZM3 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Clcf1Q9QZM3 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clcf1Q9QZM3 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clcf1Q9QZM3 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clcf1Q9QZM3 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clcf1Q9QZM3 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC11.78□□□□□ -0.52
Clcf1Q9QZM3 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clcf1Q9QZM3 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clcf1Q9QZM3 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clcf1Q9QZM3 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clcf1Q9QZM3 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clcf1Q9QZM3 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC11.78□□□□□ -0.52
Clcf1Q9QZM3 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clcf1Q9QZM3 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clcf1Q9QZM3 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC11.78□□□□□ -0.52
Clcf1Q9QZM3 Gm11618-201ENSMUST00000117946 267 ntBASIC11.78□□□□□ -0.52
Clcf1Q9QZM3 Gm12384-201ENSMUST00000119228 919 ntBASIC11.78□□□□□ -0.52
Clcf1Q9QZM3 Gm9728-201ENSMUST00000200197 1055 ntBASIC11.78□□□□□ -0.52
Clcf1Q9QZM3 AC126253.1-201ENSMUST00000227974 824 ntBASIC11.78□□□□□ -0.52
Clcf1Q9QZM3 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clcf1Q9QZM3 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Clcf1Q9QZM3 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clcf1Q9QZM3 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Clcf1Q9QZM3 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC11.78□□□□□ -0.52
Clcf1Q9QZM3 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clcf1Q9QZM3 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Clcf1Q9QZM3 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Clcf1Q9QZM3 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Clcf1Q9QZM3 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Clcf1Q9QZM3 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Clcf1Q9QZM3 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Clcf1Q9QZM3 AC096628.2-201ENSMUST00000225443 1413 ntBASIC11.77□□□□□ -0.52
Clcf1Q9QZM3 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Clcf1Q9QZM3 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Clcf1Q9QZM3 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Clcf1Q9QZM3 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Clcf1Q9QZM3 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Clcf1Q9QZM3 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Clcf1Q9QZM3 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Clcf1Q9QZM3 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Clcf1Q9QZM3 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Clcf1Q9QZM3 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Clcf1Q9QZM3 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Clcf1Q9QZM3 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
Clcf1Q9QZM3 Gm6447-201ENSMUST00000118905 835 ntBASIC11.77□□□□□ -0.53
Clcf1Q9QZM3 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Clcf1Q9QZM3 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Clcf1Q9QZM3 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Clcf1Q9QZM3 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC11.77□□□□□ -0.53
Clcf1Q9QZM3 Gm37424-201ENSMUST00000191727 561 ntBASIC11.77□□□□□ -0.53
Clcf1Q9QZM3 Gm37922-201ENSMUST00000195596 455 ntBASIC11.77□□□□□ -0.53
Clcf1Q9QZM3 Gm45841-201ENSMUST00000207700 164 ntBASIC11.77□□□□□ -0.53
Clcf1Q9QZM3 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Clcf1Q9QZM3 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC11.77□□□□□ -0.53
Clcf1Q9QZM3 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Clcf1Q9QZM3 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Clcf1Q9QZM3 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Clcf1Q9QZM3 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Clcf1Q9QZM3 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Clcf1Q9QZM3 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Clcf1Q9QZM3 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Clcf1Q9QZM3 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Clcf1Q9QZM3 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Clcf1Q9QZM3 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC11.77□□□□□ -0.53
Clcf1Q9QZM3 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Clcf1Q9QZM3 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Clcf1Q9QZM3 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Clcf1Q9QZM3 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Clcf1Q9QZM3 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC11.77□□□□□ -0.53
Clcf1Q9QZM3 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC11.77□□□□□ -0.53
Clcf1Q9QZM3 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Clcf1Q9QZM3 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Clcf1Q9QZM3 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Clcf1Q9QZM3 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms