Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Upk3aQ9JKX8 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Upk3aQ9JKX8 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Upk3aQ9JKX8 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC12.46□□□□□ -0.41
Upk3aQ9JKX8 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.46□□□□□ -0.41
Upk3aQ9JKX8 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
Upk3aQ9JKX8 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Upk3aQ9JKX8 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Upk3aQ9JKX8 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Upk3aQ9JKX8 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.41
Upk3aQ9JKX8 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Upk3aQ9JKX8 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Upk3aQ9JKX8 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Upk3aQ9JKX8 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.46□□□□□ -0.41
Upk3aQ9JKX8 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Upk3aQ9JKX8 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Upk3aQ9JKX8 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Upk3aQ9JKX8 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Upk3aQ9JKX8 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Upk3aQ9JKX8 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Upk3aQ9JKX8 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC12.46□□□□□ -0.41
Upk3aQ9JKX8 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC12.46□□□□□ -0.41
Upk3aQ9JKX8 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC12.46□□□□□ -0.41
Upk3aQ9JKX8 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Upk3aQ9JKX8 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Upk3aQ9JKX8 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Upk3aQ9JKX8 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Upk3aQ9JKX8 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Upk3aQ9JKX8 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Upk3aQ9JKX8 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Upk3aQ9JKX8 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Upk3aQ9JKX8 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Upk3aQ9JKX8 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Upk3aQ9JKX8 Dctn4-202ENSMUST00000223590 1530 ntBASIC12.46□□□□□ -0.42
Upk3aQ9JKX8 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Upk3aQ9JKX8 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.46□□□□□ -0.42
Upk3aQ9JKX8 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Upk3aQ9JKX8 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.46□□□□□ -0.42
Upk3aQ9JKX8 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Upk3aQ9JKX8 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Upk3aQ9JKX8 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.46□□□□□ -0.42
Upk3aQ9JKX8 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Upk3aQ9JKX8 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Upk3aQ9JKX8 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC12.46□□□□□ -0.42
Upk3aQ9JKX8 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Upk3aQ9JKX8 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Upk3aQ9JKX8 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Upk3aQ9JKX8 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.45□□□□□ -0.42
Upk3aQ9JKX8 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.45□□□□□ -0.42
Upk3aQ9JKX8 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Upk3aQ9JKX8 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Upk3aQ9JKX8 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.45□□□□□ -0.42
Upk3aQ9JKX8 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Upk3aQ9JKX8 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Upk3aQ9JKX8 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Upk3aQ9JKX8 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.45□□□□□ -0.42
Upk3aQ9JKX8 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Upk3aQ9JKX8 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Upk3aQ9JKX8 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Upk3aQ9JKX8 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Upk3aQ9JKX8 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Upk3aQ9JKX8 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Upk3aQ9JKX8 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Upk3aQ9JKX8 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC12.45□□□□□ -0.42
Upk3aQ9JKX8 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.45□□□□□ -0.42
Upk3aQ9JKX8 Gm11591-201ENSMUST00000120063 702 ntBASIC12.45□□□□□ -0.42
Upk3aQ9JKX8 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC12.45□□□□□ -0.42
Upk3aQ9JKX8 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC12.45□□□□□ -0.42
Upk3aQ9JKX8 Gm25261-201ENSMUST00000157416 134 ntBASIC12.45□□□□□ -0.42
Upk3aQ9JKX8 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.45□□□□□ -0.42
Upk3aQ9JKX8 Gm8565-201ENSMUST00000183259 1014 ntBASIC12.45□□□□□ -0.42
Upk3aQ9JKX8 Gm5186-201ENSMUST00000218781 920 ntBASIC12.45□□□□□ -0.42
Upk3aQ9JKX8 AC140451.2-201ENSMUST00000228030 664 ntBASIC12.45□□□□□ -0.42
Upk3aQ9JKX8 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Upk3aQ9JKX8 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Upk3aQ9JKX8 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Upk3aQ9JKX8 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Upk3aQ9JKX8 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.45□□□□□ -0.42
Upk3aQ9JKX8 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Upk3aQ9JKX8 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Upk3aQ9JKX8 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Upk3aQ9JKX8 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.45□□□□□ -0.42
Upk3aQ9JKX8 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Upk3aQ9JKX8 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Upk3aQ9JKX8 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Upk3aQ9JKX8 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Upk3aQ9JKX8 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Upk3aQ9JKX8 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Upk3aQ9JKX8 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC12.45□□□□□ -0.42
Upk3aQ9JKX8 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Upk3aQ9JKX8 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Upk3aQ9JKX8 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Upk3aQ9JKX8 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Upk3aQ9JKX8 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Upk3aQ9JKX8 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Upk3aQ9JKX8 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Upk3aQ9JKX8 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Upk3aQ9JKX8 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Upk3aQ9JKX8 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Upk3aQ9JKX8 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms