Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tubb3Q9ERD7 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tubb3Q9ERD7 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Tubb3Q9ERD7 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Tubb3Q9ERD7 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Tubb3Q9ERD7 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tubb3Q9ERD7 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Tubb3Q9ERD7 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tubb3Q9ERD7 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tubb3Q9ERD7 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
Tubb3Q9ERD7 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tubb3Q9ERD7 Gm11814-201ENSMUST00000119515 929 ntBASIC12.9□□□□□ -0.34
Tubb3Q9ERD7 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC12.9□□□□□ -0.34
Tubb3Q9ERD7 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC12.9□□□□□ -0.34
Tubb3Q9ERD7 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC12.9□□□□□ -0.34
Tubb3Q9ERD7 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.9□□□□□ -0.34
Tubb3Q9ERD7 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tubb3Q9ERD7 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.9□□□□□ -0.34
Tubb3Q9ERD7 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tubb3Q9ERD7 Gm38671-201ENSMUST00000200573 130 ntBASIC12.9□□□□□ -0.34
Tubb3Q9ERD7 Gm42550-201ENSMUST00000201553 960 ntBASIC12.9□□□□□ -0.34
Tubb3Q9ERD7 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Tubb3Q9ERD7 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Tubb3Q9ERD7 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tubb3Q9ERD7 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Tubb3Q9ERD7 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Tubb3Q9ERD7 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tubb3Q9ERD7 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tubb3Q9ERD7 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Tubb3Q9ERD7 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tubb3Q9ERD7 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tubb3Q9ERD7 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Tubb3Q9ERD7 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tubb3Q9ERD7 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Tubb3Q9ERD7 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tubb3Q9ERD7 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tubb3Q9ERD7 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Tubb3Q9ERD7 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tubb3Q9ERD7 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Tubb3Q9ERD7 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC12.9□□□□□ -0.35
Tubb3Q9ERD7 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Tubb3Q9ERD7 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Tubb3Q9ERD7 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Tubb3Q9ERD7 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tubb3Q9ERD7 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tubb3Q9ERD7 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Tubb3Q9ERD7 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Tubb3Q9ERD7 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tubb3Q9ERD7 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tubb3Q9ERD7 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tubb3Q9ERD7 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tubb3Q9ERD7 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Tubb3Q9ERD7 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Tubb3Q9ERD7 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tubb3Q9ERD7 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tubb3Q9ERD7 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tubb3Q9ERD7 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Tubb3Q9ERD7 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.89□□□□□ -0.35
Tubb3Q9ERD7 Gm12390-201ENSMUST00000117897 397 ntBASIC12.89□□□□□ -0.35
Tubb3Q9ERD7 Gm12537-201ENSMUST00000119266 1002 ntBASIC12.89□□□□□ -0.35
Tubb3Q9ERD7 Gm12070-201ENSMUST00000119551 1002 ntBASIC12.89□□□□□ -0.35
Tubb3Q9ERD7 Gm12671-201ENSMUST00000119978 1002 ntBASIC12.89□□□□□ -0.35
Tubb3Q9ERD7 Gm13292-201ENSMUST00000120014 1000 ntBASIC12.89□□□□□ -0.35
Tubb3Q9ERD7 Gm12403-201ENSMUST00000121384 959 ntBASIC12.89□□□□□ -0.35
Tubb3Q9ERD7 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Tubb3Q9ERD7 Gm10359-201ENSMUST00000180167 1002 ntBASIC12.89□□□□□ -0.35
Tubb3Q9ERD7 Gm12033-201ENSMUST00000180654 1002 ntBASIC12.89□□□□□ -0.35
Tubb3Q9ERD7 Gm5559-201ENSMUST00000180755 1002 ntBASIC12.89□□□□□ -0.35
Tubb3Q9ERD7 Gm4335-201ENSMUST00000182581 1004 ntBASIC12.89□□□□□ -0.35
Tubb3Q9ERD7 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Tubb3Q9ERD7 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Tubb3Q9ERD7 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC12.89□□□□□ -0.35
Tubb3Q9ERD7 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tubb3Q9ERD7 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tubb3Q9ERD7 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tubb3Q9ERD7 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tubb3Q9ERD7 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Tubb3Q9ERD7 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Tubb3Q9ERD7 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Tubb3Q9ERD7 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tubb3Q9ERD7 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tubb3Q9ERD7 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tubb3Q9ERD7 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.89□□□□□ -0.35
Tubb3Q9ERD7 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tubb3Q9ERD7 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tubb3Q9ERD7 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tubb3Q9ERD7 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC12.89□□□□□ -0.35
Tubb3Q9ERD7 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.89□□□□□ -0.35
Tubb3Q9ERD7 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tubb3Q9ERD7 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tubb3Q9ERD7 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Tubb3Q9ERD7 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Tubb3Q9ERD7 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Tubb3Q9ERD7 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tubb3Q9ERD7 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tubb3Q9ERD7 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tubb3Q9ERD7 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tubb3Q9ERD7 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC12.88□□□□□ -0.35
Tubb3Q9ERD7 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.88□□□□□ -0.35
Tubb3Q9ERD7 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms