Protein–RNA interactions for Protein: Q9DA73

Ccdc89, Coiled-coil domain-containing protein 89, mousemouse

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc89Q9DA73 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc89Q9DA73 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc89Q9DA73 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc89Q9DA73 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Ccdc89Q9DA73 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc89Q9DA73 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc89Q9DA73 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc89Q9DA73 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc89Q9DA73 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc89Q9DA73 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc89Q9DA73 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc89Q9DA73 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc89Q9DA73 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc89Q9DA73 Gm28911-201ENSMUST00000188837 117 ntBASIC14.21□□□□□ -0.13
Ccdc89Q9DA73 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc89Q9DA73 Gm38297-201ENSMUST00000195122 1057 ntBASIC14.21□□□□□ -0.13
Ccdc89Q9DA73 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc89Q9DA73 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc89Q9DA73 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Ccdc89Q9DA73 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Ccdc89Q9DA73 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc89Q9DA73 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc89Q9DA73 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Ccdc89Q9DA73 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc89Q9DA73 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc89Q9DA73 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Ccdc89Q9DA73 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Ccdc89Q9DA73 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Ccdc89Q9DA73 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Ccdc89Q9DA73 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ccdc89Q9DA73 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC14.2□□□□□ -0.14
Ccdc89Q9DA73 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc89Q9DA73 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC14.2□□□□□ -0.14
Ccdc89Q9DA73 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc89Q9DA73 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc89Q9DA73 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc89Q9DA73 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc89Q9DA73 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Ccdc89Q9DA73 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Ccdc89Q9DA73 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc89Q9DA73 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc89Q9DA73 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
Ccdc89Q9DA73 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc89Q9DA73 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC14.2□□□□□ -0.14
Ccdc89Q9DA73 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc89Q9DA73 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC14.2□□□□□ -0.14
Ccdc89Q9DA73 Gtpbp10-211ENSMUST00000198799 648 ntBASIC14.2□□□□□ -0.14
Ccdc89Q9DA73 Gm8463-201ENSMUST00000208573 613 ntBASIC14.2□□□□□ -0.14
Ccdc89Q9DA73 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC14.2□□□□□ -0.14
Ccdc89Q9DA73 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Ccdc89Q9DA73 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC14.2□□□□□ -0.14
Ccdc89Q9DA73 AC138604.1-201ENSMUST00000226969 739 ntBASIC14.2□□□□□ -0.14
Ccdc89Q9DA73 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc89Q9DA73 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc89Q9DA73 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc89Q9DA73 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc89Q9DA73 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc89Q9DA73 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Ccdc89Q9DA73 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc89Q9DA73 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC14.2□□□□□ -0.14
Ccdc89Q9DA73 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc89Q9DA73 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC14.2□□□□□ -0.14
Ccdc89Q9DA73 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC14.2□□□□□ -0.14
Ccdc89Q9DA73 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc89Q9DA73 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc89Q9DA73 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Ccdc89Q9DA73 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Ccdc89Q9DA73 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc89Q9DA73 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc89Q9DA73 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc89Q9DA73 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC14.2□□□□□ -0.14
Ccdc89Q9DA73 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc89Q9DA73 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc89Q9DA73 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc89Q9DA73 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc89Q9DA73 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc89Q9DA73 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC14.19□□□□□ -0.14
Ccdc89Q9DA73 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC14.19□□□□□ -0.14
Ccdc89Q9DA73 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc89Q9DA73 Gm28323-201ENSMUST00000186817 2499 ntBASIC14.19□□□□□ -0.14
Ccdc89Q9DA73 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Ccdc89Q9DA73 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc89Q9DA73 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc89Q9DA73 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc89Q9DA73 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc89Q9DA73 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc89Q9DA73 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC14.19□□□□□ -0.14
Ccdc89Q9DA73 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC14.19□□□□□ -0.14
Ccdc89Q9DA73 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC14.19□□□□□ -0.14
Ccdc89Q9DA73 Gm23984-201ENSMUST00000157139 203 ntBASIC14.19□□□□□ -0.14
Ccdc89Q9DA73 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Ccdc89Q9DA73 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc89Q9DA73 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Ccdc89Q9DA73 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC14.19□□□□□ -0.14
Ccdc89Q9DA73 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Ccdc89Q9DA73 AC162801.1-201ENSMUST00000220612 198 ntBASIC14.19□□□□□ -0.14
Ccdc89Q9DA73 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc89Q9DA73 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc89Q9DA73 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc89Q9DA73 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms