Protein–RNA interactions for Protein: Q9D8E6

Rpl4, 60S ribosomal protein L4, mousemouse

Known RBP Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl4Q9D8E6 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
Rpl4Q9D8E6 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rpl4Q9D8E6 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC13.19□□□□□ -0.3
Rpl4Q9D8E6 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Rpl4Q9D8E6 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rpl4Q9D8E6 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rpl4Q9D8E6 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rpl4Q9D8E6 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Rpl4Q9D8E6 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rpl4Q9D8E6 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rpl4Q9D8E6 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rpl4Q9D8E6 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rpl4Q9D8E6 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rpl4Q9D8E6 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rpl4Q9D8E6 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rpl4Q9D8E6 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Rpl4Q9D8E6 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rpl4Q9D8E6 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rpl4Q9D8E6 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rpl4Q9D8E6 Gm11531-201ENSMUST00000117614 555 ntBASIC13.19□□□□□ -0.3
Rpl4Q9D8E6 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Rpl4Q9D8E6 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC13.19□□□□□ -0.3
Rpl4Q9D8E6 B9d1os-201ENSMUST00000137010 674 ntBASIC13.19□□□□□ -0.3
Rpl4Q9D8E6 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rpl4Q9D8E6 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Rpl4Q9D8E6 Mir6979-201ENSMUST00000183927 56 ntBASIC13.19□□□□□ -0.3
Rpl4Q9D8E6 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC13.19□□□□□ -0.3
Rpl4Q9D8E6 AC135669.1-202ENSMUST00000216742 540 ntBASIC13.19□□□□□ -0.3
Rpl4Q9D8E6 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Rpl4Q9D8E6 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rpl4Q9D8E6 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rpl4Q9D8E6 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
Rpl4Q9D8E6 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rpl4Q9D8E6 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rpl4Q9D8E6 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Rpl4Q9D8E6 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rpl4Q9D8E6 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rpl4Q9D8E6 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rpl4Q9D8E6 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rpl4Q9D8E6 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rpl4Q9D8E6 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rpl4Q9D8E6 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rpl4Q9D8E6 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rpl4Q9D8E6 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rpl4Q9D8E6 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rpl4Q9D8E6 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rpl4Q9D8E6 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rpl4Q9D8E6 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Rpl4Q9D8E6 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rpl4Q9D8E6 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC13.18□□□□□ -0.3
Rpl4Q9D8E6 Gm11439-201ENSMUST00000118598 409 ntBASIC13.18□□□□□ -0.3
Rpl4Q9D8E6 Gm14277-201ENSMUST00000121195 360 ntBASIC13.18□□□□□ -0.3
Rpl4Q9D8E6 Gm22902-201ENSMUST00000158488 302 ntBASIC13.18□□□□□ -0.3
Rpl4Q9D8E6 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Rpl4Q9D8E6 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rpl4Q9D8E6 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC13.18□□□□□ -0.3
Rpl4Q9D8E6 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rpl4Q9D8E6 Gm18212-201ENSMUST00000211678 889 ntBASIC13.18□□□□□ -0.3
Rpl4Q9D8E6 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rpl4Q9D8E6 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rpl4Q9D8E6 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC13.18□□□□□ -0.3
Rpl4Q9D8E6 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rpl4Q9D8E6 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rpl4Q9D8E6 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rpl4Q9D8E6 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rpl4Q9D8E6 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Rpl4Q9D8E6 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rpl4Q9D8E6 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Rpl4Q9D8E6 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC13.18□□□□□ -0.3
Rpl4Q9D8E6 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC13.18□□□□□ -0.3
Rpl4Q9D8E6 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rpl4Q9D8E6 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rpl4Q9D8E6 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rpl4Q9D8E6 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rpl4Q9D8E6 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rpl4Q9D8E6 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rpl4Q9D8E6 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rpl4Q9D8E6 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Rpl4Q9D8E6 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rpl4Q9D8E6 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rpl4Q9D8E6 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rpl4Q9D8E6 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Rpl4Q9D8E6 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.17□□□□□ -0.3
Rpl4Q9D8E6 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rpl4Q9D8E6 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rpl4Q9D8E6 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rpl4Q9D8E6 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rpl4Q9D8E6 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rpl4Q9D8E6 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Rpl4Q9D8E6 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rpl4Q9D8E6 Snord83b-201ENSMUST00000104546 94 ntBASIC13.17□□□□□ -0.3
Rpl4Q9D8E6 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC13.17□□□□□ -0.3
Rpl4Q9D8E6 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rpl4Q9D8E6 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rpl4Q9D8E6 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rpl4Q9D8E6 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rpl4Q9D8E6 Gm15276-201ENSMUST00000145953 498 ntBASIC13.17□□□□□ -0.3
Rpl4Q9D8E6 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC13.17□□□□□ -0.3
Rpl4Q9D8E6 Gm2546-201ENSMUST00000182630 991 ntBASIC13.17□□□□□ -0.3
Rpl4Q9D8E6 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 119.2 ms