Protein–RNA interactions for Protein: Q9D3S3

Snx29, Sorting nexin-29, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx29Q9D3S3 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Snx29Q9D3S3 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Snx29Q9D3S3 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.2□□□□□ -0.14
Snx29Q9D3S3 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Snx29Q9D3S3 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Snx29Q9D3S3 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Snx29Q9D3S3 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Snx29Q9D3S3 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Snx29Q9D3S3 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Snx29Q9D3S3 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Snx29Q9D3S3 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Snx29Q9D3S3 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Snx29Q9D3S3 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Snx29Q9D3S3 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Snx29Q9D3S3 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Snx29Q9D3S3 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Snx29Q9D3S3 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Snx29Q9D3S3 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Snx29Q9D3S3 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
Snx29Q9D3S3 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC14.19□□□□□ -0.14
Snx29Q9D3S3 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Snx29Q9D3S3 Mir5120-201ENSMUST00000175020 78 ntBASIC14.19□□□□□ -0.14
Snx29Q9D3S3 Gm25700-201ENSMUST00000177693 110 ntBASIC14.19□□□□□ -0.14
Snx29Q9D3S3 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Snx29Q9D3S3 Gm8856-201ENSMUST00000185254 1144 ntBASIC14.19□□□□□ -0.14
Snx29Q9D3S3 Gm10312-201ENSMUST00000078515 489 ntBASIC14.19□□□□□ -0.14
Snx29Q9D3S3 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Snx29Q9D3S3 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Snx29Q9D3S3 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Snx29Q9D3S3 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Snx29Q9D3S3 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.19□□□□□ -0.14
Snx29Q9D3S3 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Snx29Q9D3S3 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Snx29Q9D3S3 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Snx29Q9D3S3 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Snx29Q9D3S3 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Snx29Q9D3S3 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Snx29Q9D3S3 Gm43908-201ENSMUST00000205074 1472 ntBASIC14.18□□□□□ -0.14
Snx29Q9D3S3 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Snx29Q9D3S3 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Snx29Q9D3S3 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Snx29Q9D3S3 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Snx29Q9D3S3 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Snx29Q9D3S3 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Snx29Q9D3S3 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Snx29Q9D3S3 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Snx29Q9D3S3 Gm15459-201ENSMUST00000117405 1941 ntBASIC14.18□□□□□ -0.14
Snx29Q9D3S3 Gm8355-201ENSMUST00000177767 1941 ntBASIC14.18□□□□□ -0.14
Snx29Q9D3S3 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Snx29Q9D3S3 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Snx29Q9D3S3 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC14.18□□□□□ -0.14
Snx29Q9D3S3 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC14.18□□□□□ -0.14
Snx29Q9D3S3 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC14.18□□□□□ -0.14
Snx29Q9D3S3 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Snx29Q9D3S3 AC165260.3-202ENSMUST00000224550 1031 ntBASIC14.18□□□□□ -0.14
Snx29Q9D3S3 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Snx29Q9D3S3 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Snx29Q9D3S3 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Snx29Q9D3S3 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Snx29Q9D3S3 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Snx29Q9D3S3 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Snx29Q9D3S3 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Snx29Q9D3S3 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Snx29Q9D3S3 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Snx29Q9D3S3 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Snx29Q9D3S3 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Snx29Q9D3S3 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Snx29Q9D3S3 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Snx29Q9D3S3 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Snx29Q9D3S3 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
Snx29Q9D3S3 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Snx29Q9D3S3 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Snx29Q9D3S3 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC14.17□□□□□ -0.14
Snx29Q9D3S3 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Snx29Q9D3S3 Gm44094-201ENSMUST00000204703 2030 ntBASIC14.17□□□□□ -0.14
Snx29Q9D3S3 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Snx29Q9D3S3 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC14.17□□□□□ -0.14
Snx29Q9D3S3 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC14.17□□□□□ -0.14
Snx29Q9D3S3 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Snx29Q9D3S3 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Snx29Q9D3S3 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Snx29Q9D3S3 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Snx29Q9D3S3 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Snx29Q9D3S3 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Snx29Q9D3S3 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.17□□□□□ -0.14
Snx29Q9D3S3 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC14.17□□□□□ -0.14
Snx29Q9D3S3 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC14.17□□□□□ -0.14
Snx29Q9D3S3 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Snx29Q9D3S3 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Snx29Q9D3S3 Gm13813-201ENSMUST00000120998 787 ntBASIC14.17□□□□□ -0.14
Snx29Q9D3S3 Gm14999-201ENSMUST00000121039 624 ntBASIC14.17□□□□□ -0.14
Snx29Q9D3S3 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Snx29Q9D3S3 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC14.17□□□□□ -0.14
Snx29Q9D3S3 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
Snx29Q9D3S3 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC14.17□□□□□ -0.14
Snx29Q9D3S3 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Snx29Q9D3S3 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Snx29Q9D3S3 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC14.17□□□□□ -0.14
Snx29Q9D3S3 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Snx29Q9D3S3 Abhd11os-203ENSMUST00000222613 363 ntBASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms