Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim42Q9D2H5 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim42Q9D2H5 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim42Q9D2H5 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Trim42Q9D2H5 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim42Q9D2H5 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim42Q9D2H5 Gm15991-202ENSMUST00000212123 3565 ntBASIC13.02□□□□□ -0.33
Trim42Q9D2H5 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim42Q9D2H5 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim42Q9D2H5 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim42Q9D2H5 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim42Q9D2H5 Gm42863-201ENSMUST00000197875 2958 ntBASIC13.02□□□□□ -0.33
Trim42Q9D2H5 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim42Q9D2H5 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim42Q9D2H5 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim42Q9D2H5 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC13.01□□□□□ -0.33
Trim42Q9D2H5 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim42Q9D2H5 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim42Q9D2H5 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim42Q9D2H5 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC13.01□□□□□ -0.33
Trim42Q9D2H5 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim42Q9D2H5 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim42Q9D2H5 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim42Q9D2H5 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC13.01□□□□□ -0.33
Trim42Q9D2H5 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim42Q9D2H5 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim42Q9D2H5 Gm27772-201ENSMUST00000184900 187 ntBASIC13.01□□□□□ -0.33
Trim42Q9D2H5 Gm44882-201ENSMUST00000205702 802 ntBASIC13.01□□□□□ -0.33
Trim42Q9D2H5 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim42Q9D2H5 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim42Q9D2H5 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim42Q9D2H5 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trim42Q9D2H5 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Trim42Q9D2H5 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Trim42Q9D2H5 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC13.01□□□□□ -0.33
Trim42Q9D2H5 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim42Q9D2H5 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Trim42Q9D2H5 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trim42Q9D2H5 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Trim42Q9D2H5 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim42Q9D2H5 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim42Q9D2H5 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim42Q9D2H5 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
Trim42Q9D2H5 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim42Q9D2H5 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim42Q9D2H5 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim42Q9D2H5 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim42Q9D2H5 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Trim42Q9D2H5 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trim42Q9D2H5 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Trim42Q9D2H5 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim42Q9D2H5 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trim42Q9D2H5 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Trim42Q9D2H5 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trim42Q9D2H5 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trim42Q9D2H5 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Trim42Q9D2H5 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim42Q9D2H5 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Trim42Q9D2H5 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC13□□□□□ -0.33
Trim42Q9D2H5 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC13□□□□□ -0.33
Trim42Q9D2H5 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC13□□□□□ -0.33
Trim42Q9D2H5 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13□□□□□ -0.33
Trim42Q9D2H5 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC13□□□□□ -0.33
Trim42Q9D2H5 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trim42Q9D2H5 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trim42Q9D2H5 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Trim42Q9D2H5 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC13□□□□□ -0.33
Trim42Q9D2H5 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
Trim42Q9D2H5 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Trim42Q9D2H5 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC13□□□□□ -0.33
Trim42Q9D2H5 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim42Q9D2H5 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim42Q9D2H5 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trim42Q9D2H5 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim42Q9D2H5 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Trim42Q9D2H5 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Trim42Q9D2H5 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Trim42Q9D2H5 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
Trim42Q9D2H5 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Trim42Q9D2H5 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim42Q9D2H5 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trim42Q9D2H5 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Trim42Q9D2H5 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Trim42Q9D2H5 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim42Q9D2H5 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trim42Q9D2H5 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim42Q9D2H5 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim42Q9D2H5 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trim42Q9D2H5 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim42Q9D2H5 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim42Q9D2H5 Gm13332-201ENSMUST00000120451 1398 ntBASIC12.99□□□□□ -0.33
Trim42Q9D2H5 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trim42Q9D2H5 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim42Q9D2H5 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim42Q9D2H5 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trim42Q9D2H5 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim42Q9D2H5 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim42Q9D2H5 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim42Q9D2H5 Gm12585-201ENSMUST00000117307 290 ntBASIC12.99□□□□□ -0.33
Trim42Q9D2H5 Gm11594-201ENSMUST00000122313 162 ntBASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms