Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ssu72Q9CY97 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.87□□□□□ -0.35
Ssu72Q9CY97 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ssu72Q9CY97 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ssu72Q9CY97 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ssu72Q9CY97 Gm11434-201ENSMUST00000122379 629 ntBASIC12.87□□□□□ -0.35
Ssu72Q9CY97 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC12.87□□□□□ -0.35
Ssu72Q9CY97 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ssu72Q9CY97 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Ssu72Q9CY97 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ssu72Q9CY97 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ssu72Q9CY97 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC12.87□□□□□ -0.35
Ssu72Q9CY97 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ssu72Q9CY97 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ssu72Q9CY97 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC12.87□□□□□ -0.35
Ssu72Q9CY97 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ssu72Q9CY97 AC165157.4-201ENSMUST00000220587 139 ntBASIC12.87□□□□□ -0.35
Ssu72Q9CY97 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ssu72Q9CY97 AC238811.1-201ENSMUST00000225302 441 ntBASIC12.87□□□□□ -0.35
Ssu72Q9CY97 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Ssu72Q9CY97 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ssu72Q9CY97 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Ssu72Q9CY97 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ssu72Q9CY97 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ssu72Q9CY97 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ssu72Q9CY97 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ssu72Q9CY97 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ssu72Q9CY97 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ssu72Q9CY97 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.86□□□□□ -0.35
Ssu72Q9CY97 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ssu72Q9CY97 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ssu72Q9CY97 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ssu72Q9CY97 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ssu72Q9CY97 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Ssu72Q9CY97 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ssu72Q9CY97 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ssu72Q9CY97 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ssu72Q9CY97 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Ssu72Q9CY97 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ssu72Q9CY97 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ssu72Q9CY97 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ssu72Q9CY97 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.86□□□□□ -0.35
Ssu72Q9CY97 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
Ssu72Q9CY97 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ssu72Q9CY97 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC12.86□□□□□ -0.35
Ssu72Q9CY97 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Ssu72Q9CY97 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Ssu72Q9CY97 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ssu72Q9CY97 Rubie-203ENSMUST00000227803 2430 ntBASIC12.86□□□□□ -0.35
Ssu72Q9CY97 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ssu72Q9CY97 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ssu72Q9CY97 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ssu72Q9CY97 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Ssu72Q9CY97 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ssu72Q9CY97 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC12.86□□□□□ -0.35
Ssu72Q9CY97 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
Ssu72Q9CY97 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC12.86□□□□□ -0.35
Ssu72Q9CY97 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.86□□□□□ -0.35
Ssu72Q9CY97 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.86□□□□□ -0.35
Ssu72Q9CY97 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Ssu72Q9CY97 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC12.86□□□□□ -0.35
Ssu72Q9CY97 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ssu72Q9CY97 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ssu72Q9CY97 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ssu72Q9CY97 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC12.86□□□□□ -0.35
Ssu72Q9CY97 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Ssu72Q9CY97 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Ssu72Q9CY97 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ssu72Q9CY97 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ssu72Q9CY97 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.86□□□□□ -0.35
Ssu72Q9CY97 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ssu72Q9CY97 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.86□□□□□ -0.35
Ssu72Q9CY97 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.86□□□□□ -0.35
Ssu72Q9CY97 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ssu72Q9CY97 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ssu72Q9CY97 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ssu72Q9CY97 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ssu72Q9CY97 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ssu72Q9CY97 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
Ssu72Q9CY97 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Ssu72Q9CY97 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ssu72Q9CY97 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ssu72Q9CY97 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ssu72Q9CY97 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.85□□□□□ -0.35
Ssu72Q9CY97 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ssu72Q9CY97 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ssu72Q9CY97 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ssu72Q9CY97 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ssu72Q9CY97 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Ssu72Q9CY97 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC12.85□□□□□ -0.35
Ssu72Q9CY97 Gm12291-201ENSMUST00000121627 311 ntBASIC12.85□□□□□ -0.35
Ssu72Q9CY97 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC12.85□□□□□ -0.35
Ssu72Q9CY97 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Ssu72Q9CY97 AC151286.1-201ENSMUST00000198489 145 ntBASIC12.85□□□□□ -0.35
Ssu72Q9CY97 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC12.85□□□□□ -0.35
Ssu72Q9CY97 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ssu72Q9CY97 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ssu72Q9CY97 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Ssu72Q9CY97 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ssu72Q9CY97 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms