Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Gm43094-201ENSMUST00000196549 921 ntBASIC14.15□□□□□ -0.14
Ssr1Q9CY50 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Ssr1Q9CY50 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ssr1Q9CY50 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC14.15□□□□□ -0.14
Ssr1Q9CY50 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ssr1Q9CY50 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Ssr1Q9CY50 Gm15459-201ENSMUST00000117405 1941 ntBASIC14.15□□□□□ -0.14
Ssr1Q9CY50 Gm8355-201ENSMUST00000177767 1941 ntBASIC14.15□□□□□ -0.14
Ssr1Q9CY50 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ssr1Q9CY50 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ssr1Q9CY50 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC14.14□□□□□ -0.15
Ssr1Q9CY50 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ssr1Q9CY50 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ssr1Q9CY50 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ssr1Q9CY50 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ssr1Q9CY50 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ssr1Q9CY50 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ssr1Q9CY50 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ssr1Q9CY50 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ssr1Q9CY50 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC14.14□□□□□ -0.15
Ssr1Q9CY50 Gm13886-201ENSMUST00000117876 1183 ntBASIC14.14□□□□□ -0.15
Ssr1Q9CY50 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ssr1Q9CY50 Gm12537-201ENSMUST00000119266 1002 ntBASIC14.14□□□□□ -0.15
Ssr1Q9CY50 Gm12070-201ENSMUST00000119551 1002 ntBASIC14.14□□□□□ -0.15
Ssr1Q9CY50 Gm12671-201ENSMUST00000119978 1002 ntBASIC14.14□□□□□ -0.15
Ssr1Q9CY50 Gm13292-201ENSMUST00000120014 1000 ntBASIC14.14□□□□□ -0.15
Ssr1Q9CY50 Gm12403-201ENSMUST00000121384 959 ntBASIC14.14□□□□□ -0.15
Ssr1Q9CY50 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC14.14□□□□□ -0.15
Ssr1Q9CY50 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC14.14□□□□□ -0.15
Ssr1Q9CY50 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC14.14□□□□□ -0.15
Ssr1Q9CY50 Gm10359-201ENSMUST00000180167 1002 ntBASIC14.14□□□□□ -0.15
Ssr1Q9CY50 Gm12033-201ENSMUST00000180654 1002 ntBASIC14.14□□□□□ -0.15
Ssr1Q9CY50 Gm5559-201ENSMUST00000180755 1002 ntBASIC14.14□□□□□ -0.15
Ssr1Q9CY50 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Ssr1Q9CY50 Gm4335-201ENSMUST00000182581 1004 ntBASIC14.14□□□□□ -0.15
Ssr1Q9CY50 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC14.14□□□□□ -0.15
Ssr1Q9CY50 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ssr1Q9CY50 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Ssr1Q9CY50 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ssr1Q9CY50 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ssr1Q9CY50 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ssr1Q9CY50 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ssr1Q9CY50 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ssr1Q9CY50 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC14.14□□□□□ -0.15
Ssr1Q9CY50 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ssr1Q9CY50 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ssr1Q9CY50 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ssr1Q9CY50 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ssr1Q9CY50 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ssr1Q9CY50 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ssr1Q9CY50 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Ssr1Q9CY50 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ssr1Q9CY50 Gm43417-201ENSMUST00000201586 5207 ntBASIC14.13□□□□□ -0.15
Ssr1Q9CY50 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ssr1Q9CY50 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ssr1Q9CY50 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ssr1Q9CY50 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ssr1Q9CY50 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ssr1Q9CY50 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ssr1Q9CY50 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ssr1Q9CY50 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ssr1Q9CY50 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC14.13□□□□□ -0.15
Ssr1Q9CY50 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ssr1Q9CY50 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Ssr1Q9CY50 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Ssr1Q9CY50 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ssr1Q9CY50 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ssr1Q9CY50 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Ssr1Q9CY50 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ssr1Q9CY50 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC14.13□□□□□ -0.15
Ssr1Q9CY50 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ssr1Q9CY50 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Ssr1Q9CY50 Gm21854-201ENSMUST00000179901 471 ntBASIC14.13□□□□□ -0.15
Ssr1Q9CY50 Mir7684-201ENSMUST00000183858 60 ntBASIC14.13□□□□□ -0.15
Ssr1Q9CY50 Gm28760-201ENSMUST00000185995 736 ntBASIC14.13□□□□□ -0.15
Ssr1Q9CY50 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ssr1Q9CY50 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC14.13□□□□□ -0.15
Ssr1Q9CY50 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ssr1Q9CY50 Gm17870-201ENSMUST00000219489 1174 ntBASIC14.13□□□□□ -0.15
Ssr1Q9CY50 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ssr1Q9CY50 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ssr1Q9CY50 Gm5939-201ENSMUST00000119613 2874 ntBASIC14.13□□□□□ -0.15
Ssr1Q9CY50 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ssr1Q9CY50 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ssr1Q9CY50 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ssr1Q9CY50 Gm10176-201ENSMUST00000159707 2264 ntBASIC14.13□□□□□ -0.15
Ssr1Q9CY50 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ssr1Q9CY50 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ssr1Q9CY50 Gm7002-201ENSMUST00000221386 2165 ntBASIC14.13□□□□□ -0.15
Ssr1Q9CY50 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC14.13□□□□□ -0.15
Ssr1Q9CY50 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ssr1Q9CY50 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Ssr1Q9CY50 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ssr1Q9CY50 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ssr1Q9CY50 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ssr1Q9CY50 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ssr1Q9CY50 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Ssr1Q9CY50 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ssr1Q9CY50 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ssr1Q9CY50 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms