Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.28□□□□□ -0.44
Ska1Q9CPV1 Gm5867-201ENSMUST00000063197 592 ntBASIC12.28□□□□□ -0.44
Ska1Q9CPV1 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.28□□□□□ -0.44
Ska1Q9CPV1 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ska1Q9CPV1 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ska1Q9CPV1 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ska1Q9CPV1 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ska1Q9CPV1 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ska1Q9CPV1 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Ska1Q9CPV1 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ska1Q9CPV1 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ska1Q9CPV1 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ska1Q9CPV1 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ska1Q9CPV1 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ska1Q9CPV1 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC12.28□□□□□ -0.44
Ska1Q9CPV1 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.28□□□□□ -0.44
Ska1Q9CPV1 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ska1Q9CPV1 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ska1Q9CPV1 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ska1Q9CPV1 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.28□□□□□ -0.44
Ska1Q9CPV1 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Ska1Q9CPV1 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ska1Q9CPV1 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ska1Q9CPV1 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ska1Q9CPV1 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ska1Q9CPV1 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Ska1Q9CPV1 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Ska1Q9CPV1 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ska1Q9CPV1 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ska1Q9CPV1 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.27□□□□□ -0.44
Ska1Q9CPV1 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.27□□□□□ -0.44
Ska1Q9CPV1 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ska1Q9CPV1 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ska1Q9CPV1 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Ska1Q9CPV1 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Ska1Q9CPV1 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ska1Q9CPV1 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ska1Q9CPV1 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ska1Q9CPV1 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ska1Q9CPV1 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC12.27□□□□□ -0.45
Ska1Q9CPV1 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC12.27□□□□□ -0.45
Ska1Q9CPV1 Gm14730-201ENSMUST00000122378 1045 ntBASIC12.27□□□□□ -0.45
Ska1Q9CPV1 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ska1Q9CPV1 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ska1Q9CPV1 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ska1Q9CPV1 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.27□□□□□ -0.45
Ska1Q9CPV1 Gm7498-201ENSMUST00000203282 1084 ntBASIC12.27□□□□□ -0.45
Ska1Q9CPV1 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC12.27□□□□□ -0.45
Ska1Q9CPV1 AC159114.1-201ENSMUST00000220349 266 ntBASIC12.27□□□□□ -0.45
Ska1Q9CPV1 Gm17330-201ENSMUST00000221047 165 ntBASIC12.27□□□□□ -0.45
Ska1Q9CPV1 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ska1Q9CPV1 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC12.27□□□□□ -0.45
Ska1Q9CPV1 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.27□□□□□ -0.45
Ska1Q9CPV1 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ska1Q9CPV1 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ska1Q9CPV1 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ska1Q9CPV1 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ska1Q9CPV1 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ska1Q9CPV1 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ska1Q9CPV1 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.27□□□□□ -0.45
Ska1Q9CPV1 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ska1Q9CPV1 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ska1Q9CPV1 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ska1Q9CPV1 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ska1Q9CPV1 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ska1Q9CPV1 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Ska1Q9CPV1 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ska1Q9CPV1 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Ska1Q9CPV1 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.26□□□□□ -0.45
Ska1Q9CPV1 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ska1Q9CPV1 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.26□□□□□ -0.45
Ska1Q9CPV1 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ska1Q9CPV1 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ska1Q9CPV1 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ska1Q9CPV1 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.26□□□□□ -0.45
Ska1Q9CPV1 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ska1Q9CPV1 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ska1Q9CPV1 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Ska1Q9CPV1 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ska1Q9CPV1 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ska1Q9CPV1 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ska1Q9CPV1 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ska1Q9CPV1 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ska1Q9CPV1 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ska1Q9CPV1 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC12.26□□□□□ -0.45
Ska1Q9CPV1 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.26□□□□□ -0.45
Ska1Q9CPV1 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC12.26□□□□□ -0.45
Ska1Q9CPV1 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ska1Q9CPV1 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Ska1Q9CPV1 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC12.26□□□□□ -0.45
Ska1Q9CPV1 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ska1Q9CPV1 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC12.26□□□□□ -0.45
Ska1Q9CPV1 AC139580.1-202ENSMUST00000223574 928 ntBASIC12.26□□□□□ -0.45
Ska1Q9CPV1 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ska1Q9CPV1 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ska1Q9CPV1 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ska1Q9CPV1 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ska1Q9CPV1 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ska1Q9CPV1 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ska1Q9CPV1 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms