Protein–RNA interactions for Protein: Q99PM3

Gtf2a1, Transcription initiation factor IIA subunit 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2a1Q99PM3 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gtf2a1Q99PM3 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC14.15□□□□□ -0.14
Gtf2a1Q99PM3 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Gtf2a1Q99PM3 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gtf2a1Q99PM3 8030423F21Rik-201ENSMUST00000064097 2851 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Gtf2a1Q99PM3 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC14.15□□□□□ -0.14
Gtf2a1Q99PM3 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Gtf2a1Q99PM3 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gtf2a1Q99PM3 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Gtf2a1Q99PM3 AC124751.1-201ENSMUST00000222716 1408 ntBASIC14.15□□□□□ -0.14
Gtf2a1Q99PM3 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gtf2a1Q99PM3 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gtf2a1Q99PM3 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gtf2a1Q99PM3 Olfr71-203ENSMUST00000217544 2707 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Gtf2a1Q99PM3 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Gtf2a1Q99PM3 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Gtf2a1Q99PM3 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gtf2a1Q99PM3 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gtf2a1Q99PM3 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gtf2a1Q99PM3 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gtf2a1Q99PM3 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gtf2a1Q99PM3 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gtf2a1Q99PM3 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gtf2a1Q99PM3 Gm12296-201ENSMUST00000144922 3220 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Gtf2a1Q99PM3 Slc6a9-202ENSMUST00000063857 3146 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gtf2a1Q99PM3 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Gtf2a1Q99PM3 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC14.14□□□□□ -0.15
Gtf2a1Q99PM3 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gtf2a1Q99PM3 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Gtf2a1Q99PM3 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC14.14□□□□□ -0.15
Gtf2a1Q99PM3 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Gtf2a1Q99PM3 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC14.14□□□□□ -0.15
Gtf2a1Q99PM3 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gtf2a1Q99PM3 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Gtf2a1Q99PM3 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gtf2a1Q99PM3 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gtf2a1Q99PM3 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gtf2a1Q99PM3 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gtf2a1Q99PM3 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Gtf2a1Q99PM3 Htr1d-203ENSMUST00000121571 2426 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gtf2a1Q99PM3 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gtf2a1Q99PM3 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Gtf2a1Q99PM3 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gtf2a1Q99PM3 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gtf2a1Q99PM3 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Gtf2a1Q99PM3 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gtf2a1Q99PM3 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC14.14□□□□□ -0.15
Gtf2a1Q99PM3 Caprin1-202ENSMUST00000111147 4069 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gtf2a1Q99PM3 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC14.14□□□□□ -0.15
Gtf2a1Q99PM3 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.14□□□□□ -0.15
Gtf2a1Q99PM3 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gtf2a1Q99PM3 Ezr-201ENSMUST00000064234 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gtf2a1Q99PM3 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gtf2a1Q99PM3 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gtf2a1Q99PM3 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC14.13□□□□□ -0.15
Gtf2a1Q99PM3 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Gtf2a1Q99PM3 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC14.13□□□□□ -0.15
Gtf2a1Q99PM3 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gtf2a1Q99PM3 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Gtf2a1Q99PM3 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC14.13□□□□□ -0.15
Gtf2a1Q99PM3 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Gtf2a1Q99PM3 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gtf2a1Q99PM3 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gtf2a1Q99PM3 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gtf2a1Q99PM3 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC14.13□□□□□ -0.15
Gtf2a1Q99PM3 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Gtf2a1Q99PM3 Gm42463-201ENSMUST00000198041 4886 ntBASIC14.13□□□□□ -0.15
Gtf2a1Q99PM3 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gtf2a1Q99PM3 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gtf2a1Q99PM3 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC14.13□□□□□ -0.15
Gtf2a1Q99PM3 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Gtf2a1Q99PM3 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Gtf2a1Q99PM3 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC14.13□□□□□ -0.15
Gtf2a1Q99PM3 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC14.13□□□□□ -0.15
Gtf2a1Q99PM3 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC14.13□□□□□ -0.15
Gtf2a1Q99PM3 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC14.13□□□□□ -0.15
Gtf2a1Q99PM3 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC14.13□□□□□ -0.15
Gtf2a1Q99PM3 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC14.13□□□□□ -0.15
Gtf2a1Q99PM3 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gtf2a1Q99PM3 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gtf2a1Q99PM3 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gtf2a1Q99PM3 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gtf2a1Q99PM3 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Gtf2a1Q99PM3 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Gtf2a1Q99PM3 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gtf2a1Q99PM3 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gtf2a1Q99PM3 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gtf2a1Q99PM3 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC14.13□□□□□ -0.15
Gtf2a1Q99PM3 Gm36940-201ENSMUST00000194281 2036 ntBASIC14.13□□□□□ -0.15
Gtf2a1Q99PM3 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gtf2a1Q99PM3 Ing3-202ENSMUST00000115389 2546 ntTSL 5 BASIC14.13□□□□□ -0.15
Gtf2a1Q99PM3 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Gtf2a1Q99PM3 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC14.13□□□□□ -0.15
Gtf2a1Q99PM3 Gramd1b-213ENSMUST00000211853 2659 ntTSL 5 BASIC14.13□□□□□ -0.15
Gtf2a1Q99PM3 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gtf2a1Q99PM3 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gtf2a1Q99PM3 Oprm1-212ENSMUST00000105603 2053 ntTSL 5 BASIC14.13□□□□□ -0.15
Gtf2a1Q99PM3 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Gtf2a1Q99PM3 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Gtf2a1Q99PM3 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms