Protein–RNA interactions for Protein: Q99NH8

Trem2, Triggering receptor expressed on myeloid cells 2, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem2Q99NH8 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trem2Q99NH8 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trem2Q99NH8 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trem2Q99NH8 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trem2Q99NH8 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trem2Q99NH8 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trem2Q99NH8 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trem2Q99NH8 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Trem2Q99NH8 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trem2Q99NH8 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC13.19□□□□□ -0.3
Trem2Q99NH8 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trem2Q99NH8 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trem2Q99NH8 Gm11814-201ENSMUST00000119515 929 ntBASIC13.19□□□□□ -0.3
Trem2Q99NH8 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trem2Q99NH8 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trem2Q99NH8 Gm9002-201ENSMUST00000178437 499 ntBASIC13.19□□□□□ -0.3
Trem2Q99NH8 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trem2Q99NH8 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC13.19□□□□□ -0.3
Trem2Q99NH8 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC13.19□□□□□ -0.3
Trem2Q99NH8 Gm8099-201ENSMUST00000200510 742 ntBASIC13.19□□□□□ -0.3
Trem2Q99NH8 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Trem2Q99NH8 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trem2Q99NH8 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Trem2Q99NH8 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trem2Q99NH8 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trem2Q99NH8 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trem2Q99NH8 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trem2Q99NH8 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trem2Q99NH8 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Trem2Q99NH8 Gm43868-201ENSMUST00000205187 2114 ntBASIC13.19□□□□□ -0.3
Trem2Q99NH8 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trem2Q99NH8 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trem2Q99NH8 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trem2Q99NH8 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trem2Q99NH8 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trem2Q99NH8 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trem2Q99NH8 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trem2Q99NH8 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trem2Q99NH8 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trem2Q99NH8 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trem2Q99NH8 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trem2Q99NH8 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trem2Q99NH8 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC13.18□□□□□ -0.3
Trem2Q99NH8 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trem2Q99NH8 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trem2Q99NH8 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC13.18□□□□□ -0.3
Trem2Q99NH8 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trem2Q99NH8 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trem2Q99NH8 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC13.18□□□□□ -0.3
Trem2Q99NH8 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Trem2Q99NH8 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trem2Q99NH8 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC13.18□□□□□ -0.3
Trem2Q99NH8 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trem2Q99NH8 Gm12960-201ENSMUST00000120017 1066 ntBASIC13.18□□□□□ -0.3
Trem2Q99NH8 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trem2Q99NH8 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC13.18□□□□□ -0.3
Trem2Q99NH8 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trem2Q99NH8 Gm37042-201ENSMUST00000193816 581 ntBASIC13.18□□□□□ -0.3
Trem2Q99NH8 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC13.18□□□□□ -0.3
Trem2Q99NH8 AC134254.1-201ENSMUST00000221362 167 ntBASIC13.18□□□□□ -0.3
Trem2Q99NH8 AC169036.1-201ENSMUST00000227994 296 ntBASIC13.18□□□□□ -0.3
Trem2Q99NH8 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trem2Q99NH8 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trem2Q99NH8 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC13.18□□□□□ -0.3
Trem2Q99NH8 Gm5356-201ENSMUST00000093326 615 ntBASIC13.18□□□□□ -0.3
Trem2Q99NH8 Gm14608-201ENSMUST00000120030 1553 ntBASIC13.18□□□□□ -0.3
Trem2Q99NH8 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trem2Q99NH8 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trem2Q99NH8 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trem2Q99NH8 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trem2Q99NH8 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Trem2Q99NH8 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trem2Q99NH8 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trem2Q99NH8 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Trem2Q99NH8 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trem2Q99NH8 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trem2Q99NH8 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trem2Q99NH8 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
Trem2Q99NH8 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
Trem2Q99NH8 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trem2Q99NH8 Rubie-203ENSMUST00000227803 2430 ntBASIC13.18□□□□□ -0.3
Trem2Q99NH8 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trem2Q99NH8 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trem2Q99NH8 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
Trem2Q99NH8 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trem2Q99NH8 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trem2Q99NH8 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trem2Q99NH8 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trem2Q99NH8 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trem2Q99NH8 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trem2Q99NH8 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trem2Q99NH8 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trem2Q99NH8 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC13.17□□□□□ -0.3
Trem2Q99NH8 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trem2Q99NH8 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.17□□□□□ -0.3
Trem2Q99NH8 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trem2Q99NH8 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC13.17□□□□□ -0.3
Trem2Q99NH8 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC13.17□□□□□ -0.3
Trem2Q99NH8 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trem2Q99NH8 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms