Protein–RNA interactions for Protein: Q99NB8

Ubqln4, Ubiquilin-4, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln4Q99NB8 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ubqln4Q99NB8 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC11.81□□□□□ -0.52
Ubqln4Q99NB8 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ubqln4Q99NB8 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ubqln4Q99NB8 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ubqln4Q99NB8 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ubqln4Q99NB8 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ubqln4Q99NB8 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ubqln4Q99NB8 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ubqln4Q99NB8 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC11.81□□□□□ -0.52
Ubqln4Q99NB8 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ubqln4Q99NB8 Mup-ps23-201ENSMUST00000118063 630 ntBASIC11.81□□□□□ -0.52
Ubqln4Q99NB8 Gm12138-201ENSMUST00000122180 951 ntBASIC11.81□□□□□ -0.52
Ubqln4Q99NB8 Gm10156-201ENSMUST00000122364 462 ntBASIC11.81□□□□□ -0.52
Ubqln4Q99NB8 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ubqln4Q99NB8 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ubqln4Q99NB8 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC11.81□□□□□ -0.52
Ubqln4Q99NB8 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC11.81□□□□□ -0.52
Ubqln4Q99NB8 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Ubqln4Q99NB8 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ubqln4Q99NB8 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC11.81□□□□□ -0.52
Ubqln4Q99NB8 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC11.81□□□□□ -0.52
Ubqln4Q99NB8 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ubqln4Q99NB8 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ubqln4Q99NB8 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ubqln4Q99NB8 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ubqln4Q99NB8 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ubqln4Q99NB8 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ubqln4Q99NB8 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ubqln4Q99NB8 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ubqln4Q99NB8 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ubqln4Q99NB8 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ubqln4Q99NB8 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ubqln4Q99NB8 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Ubqln4Q99NB8 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Ubqln4Q99NB8 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
Ubqln4Q99NB8 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Ubqln4Q99NB8 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ubqln4Q99NB8 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ubqln4Q99NB8 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ubqln4Q99NB8 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ubqln4Q99NB8 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Ubqln4Q99NB8 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ubqln4Q99NB8 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ubqln4Q99NB8 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ubqln4Q99NB8 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ubqln4Q99NB8 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ubqln4Q99NB8 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ubqln4Q99NB8 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ubqln4Q99NB8 Proscos-202ENSMUST00000178990 666 ntBASIC11.8□□□□□ -0.52
Ubqln4Q99NB8 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC11.8□□□□□ -0.52
Ubqln4Q99NB8 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC11.8□□□□□ -0.52
Ubqln4Q99NB8 Gm45059-201ENSMUST00000205558 1077 ntBASIC11.8□□□□□ -0.52
Ubqln4Q99NB8 Gm8598-201ENSMUST00000221184 836 ntBASIC11.8□□□□□ -0.52
Ubqln4Q99NB8 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ubqln4Q99NB8 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ubqln4Q99NB8 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ubqln4Q99NB8 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Ubqln4Q99NB8 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Ubqln4Q99NB8 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ubqln4Q99NB8 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ubqln4Q99NB8 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC11.8□□□□□ -0.52
Ubqln4Q99NB8 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ubqln4Q99NB8 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ubqln4Q99NB8 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ubqln4Q99NB8 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ubqln4Q99NB8 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ubqln4Q99NB8 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ubqln4Q99NB8 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ubqln4Q99NB8 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ubqln4Q99NB8 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ubqln4Q99NB8 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ubqln4Q99NB8 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ubqln4Q99NB8 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ubqln4Q99NB8 Ssr1-203ENSMUST00000225246 1825 ntBASIC11.79□□□□□ -0.52
Ubqln4Q99NB8 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC11.79□□□□□ -0.52
Ubqln4Q99NB8 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ubqln4Q99NB8 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ubqln4Q99NB8 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ubqln4Q99NB8 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ubqln4Q99NB8 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ubqln4Q99NB8 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Ubqln4Q99NB8 Mir686-201ENSMUST00000102174 109 ntBASIC11.79□□□□□ -0.52
Ubqln4Q99NB8 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Ubqln4Q99NB8 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ubqln4Q99NB8 Gm11814-201ENSMUST00000119515 929 ntBASIC11.79□□□□□ -0.52
Ubqln4Q99NB8 Gm12539-201ENSMUST00000121549 1098 ntBASIC11.79□□□□□ -0.52
Ubqln4Q99NB8 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
Ubqln4Q99NB8 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ubqln4Q99NB8 Gm27486-201ENSMUST00000184923 80 ntBASIC11.79□□□□□ -0.52
Ubqln4Q99NB8 Gm28693-202ENSMUST00000190758 331 ntBASIC11.79□□□□□ -0.52
Ubqln4Q99NB8 Ighv8-10-201ENSMUST00000199579 358 ntBASIC11.79□□□□□ -0.52
Ubqln4Q99NB8 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC11.79□□□□□ -0.52
Ubqln4Q99NB8 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ubqln4Q99NB8 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ubqln4Q99NB8 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ubqln4Q99NB8 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ubqln4Q99NB8 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ubqln4Q99NB8 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Ubqln4Q99NB8 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms