Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf111Q99ML9 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf111Q99ML9 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf111Q99ML9 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
Rnf111Q99ML9 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf111Q99ML9 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf111Q99ML9 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf111Q99ML9 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf111Q99ML9 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.59□□□□□ -0.39
Rnf111Q99ML9 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf111Q99ML9 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf111Q99ML9 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Rnf111Q99ML9 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf111Q99ML9 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf111Q99ML9 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf111Q99ML9 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf111Q99ML9 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12.59□□□□□ -0.39
Rnf111Q99ML9 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf111Q99ML9 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Rnf111Q99ML9 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf111Q99ML9 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf111Q99ML9 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf111Q99ML9 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf111Q99ML9 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf111Q99ML9 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf111Q99ML9 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC12.59□□□□□ -0.39
Rnf111Q99ML9 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC12.59□□□□□ -0.39
Rnf111Q99ML9 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf111Q99ML9 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.59□□□□□ -0.39
Rnf111Q99ML9 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Rnf111Q99ML9 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC12.59□□□□□ -0.39
Rnf111Q99ML9 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf111Q99ML9 AC132467.2-202ENSMUST00000227726 559 ntBASIC12.59□□□□□ -0.39
Rnf111Q99ML9 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
Rnf111Q99ML9 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Rnf111Q99ML9 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.59□□□□□ -0.39
Rnf111Q99ML9 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf111Q99ML9 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.59□□□□□ -0.39
Rnf111Q99ML9 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf111Q99ML9 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.59□□□□□ -0.39
Rnf111Q99ML9 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.59□□□□□ -0.39
Rnf111Q99ML9 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.59□□□□□ -0.39
Rnf111Q99ML9 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf111Q99ML9 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf111Q99ML9 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf111Q99ML9 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf111Q99ML9 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf111Q99ML9 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.58□□□□□ -0.39
Rnf111Q99ML9 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.58□□□□□ -0.39
Rnf111Q99ML9 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Rnf111Q99ML9 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Rnf111Q99ML9 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Rnf111Q99ML9 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.58□□□□□ -0.39
Rnf111Q99ML9 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.58□□□□□ -0.4
Rnf111Q99ML9 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf111Q99ML9 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.58□□□□□ -0.4
Rnf111Q99ML9 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.58□□□□□ -0.4
Rnf111Q99ML9 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf111Q99ML9 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.58□□□□□ -0.4
Rnf111Q99ML9 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.58□□□□□ -0.4
Rnf111Q99ML9 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.58□□□□□ -0.4
Rnf111Q99ML9 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf111Q99ML9 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Rnf111Q99ML9 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf111Q99ML9 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf111Q99ML9 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf111Q99ML9 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC12.58□□□□□ -0.4
Rnf111Q99ML9 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf111Q99ML9 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf111Q99ML9 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf111Q99ML9 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf111Q99ML9 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC12.58□□□□□ -0.4
Rnf111Q99ML9 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.58□□□□□ -0.4
Rnf111Q99ML9 Gm42550-201ENSMUST00000201553 960 ntBASIC12.58□□□□□ -0.4
Rnf111Q99ML9 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.58□□□□□ -0.4
Rnf111Q99ML9 AC238811.3-201ENSMUST00000225422 709 ntBASIC12.58□□□□□ -0.4
Rnf111Q99ML9 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf111Q99ML9 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.58□□□□□ -0.4
Rnf111Q99ML9 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf111Q99ML9 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.58□□□□□ -0.4
Rnf111Q99ML9 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf111Q99ML9 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf111Q99ML9 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf111Q99ML9 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf111Q99ML9 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf111Q99ML9 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Rnf111Q99ML9 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf111Q99ML9 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf111Q99ML9 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf111Q99ML9 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf111Q99ML9 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.57□□□□□ -0.4
Rnf111Q99ML9 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf111Q99ML9 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf111Q99ML9 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf111Q99ML9 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf111Q99ML9 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf111Q99ML9 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf111Q99ML9 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf111Q99ML9 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf111Q99ML9 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms