Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cstf3Q99LI7 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12.56□□□□□ -0.4
Cstf3Q99LI7 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cstf3Q99LI7 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cstf3Q99LI7 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cstf3Q99LI7 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Cstf3Q99LI7 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cstf3Q99LI7 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
Cstf3Q99LI7 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cstf3Q99LI7 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.56□□□□□ -0.4
Cstf3Q99LI7 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cstf3Q99LI7 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cstf3Q99LI7 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC12.56□□□□□ -0.4
Cstf3Q99LI7 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC12.56□□□□□ -0.4
Cstf3Q99LI7 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC12.56□□□□□ -0.4
Cstf3Q99LI7 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cstf3Q99LI7 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cstf3Q99LI7 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cstf3Q99LI7 Gm15823-201ENSMUST00000064305 670 ntBASIC12.56□□□□□ -0.4
Cstf3Q99LI7 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cstf3Q99LI7 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Cstf3Q99LI7 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Cstf3Q99LI7 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cstf3Q99LI7 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cstf3Q99LI7 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.56□□□□□ -0.4
Cstf3Q99LI7 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cstf3Q99LI7 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.56□□□□□ -0.4
Cstf3Q99LI7 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cstf3Q99LI7 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cstf3Q99LI7 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cstf3Q99LI7 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cstf3Q99LI7 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cstf3Q99LI7 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cstf3Q99LI7 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cstf3Q99LI7 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cstf3Q99LI7 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cstf3Q99LI7 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cstf3Q99LI7 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cstf3Q99LI7 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cstf3Q99LI7 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cstf3Q99LI7 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Cstf3Q99LI7 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Cstf3Q99LI7 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cstf3Q99LI7 Gm5303-201ENSMUST00000117943 1252 ntBASIC12.55□□□□□ -0.4
Cstf3Q99LI7 Gm11978-201ENSMUST00000122315 466 ntBASIC12.55□□□□□ -0.4
Cstf3Q99LI7 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Cstf3Q99LI7 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
Cstf3Q99LI7 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cstf3Q99LI7 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cstf3Q99LI7 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC12.55□□□□□ -0.4
Cstf3Q99LI7 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.55□□□□□ -0.4
Cstf3Q99LI7 AC132467.2-202ENSMUST00000227726 559 ntBASIC12.55□□□□□ -0.4
Cstf3Q99LI7 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cstf3Q99LI7 Gm2423-201ENSMUST00000074863 733 ntBASIC12.55□□□□□ -0.4
Cstf3Q99LI7 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cstf3Q99LI7 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC12.55□□□□□ -0.4
Cstf3Q99LI7 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cstf3Q99LI7 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Cstf3Q99LI7 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.55□□□□□ -0.4
Cstf3Q99LI7 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cstf3Q99LI7 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cstf3Q99LI7 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cstf3Q99LI7 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cstf3Q99LI7 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC12.55□□□□□ -0.4
Cstf3Q99LI7 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cstf3Q99LI7 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cstf3Q99LI7 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cstf3Q99LI7 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cstf3Q99LI7 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Cstf3Q99LI7 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cstf3Q99LI7 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Cstf3Q99LI7 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cstf3Q99LI7 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.54□□□□□ -0.4
Cstf3Q99LI7 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cstf3Q99LI7 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Cstf3Q99LI7 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cstf3Q99LI7 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cstf3Q99LI7 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cstf3Q99LI7 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cstf3Q99LI7 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cstf3Q99LI7 AL593843.1-201ENSMUST00000195891 145 ntBASIC12.54□□□□□ -0.4
Cstf3Q99LI7 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cstf3Q99LI7 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cstf3Q99LI7 AC125117.1-201ENSMUST00000228121 468 ntBASIC12.54□□□□□ -0.4
Cstf3Q99LI7 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cstf3Q99LI7 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cstf3Q99LI7 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Cstf3Q99LI7 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cstf3Q99LI7 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cstf3Q99LI7 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cstf3Q99LI7 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cstf3Q99LI7 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.54□□□□□ -0.4
Cstf3Q99LI7 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cstf3Q99LI7 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.54□□□□□ -0.4
Cstf3Q99LI7 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cstf3Q99LI7 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cstf3Q99LI7 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Cstf3Q99LI7 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cstf3Q99LI7 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cstf3Q99LI7 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms