Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RtcbQ99LF4 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
RtcbQ99LF4 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RtcbQ99LF4 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RtcbQ99LF4 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
RtcbQ99LF4 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
RtcbQ99LF4 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RtcbQ99LF4 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RtcbQ99LF4 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
RtcbQ99LF4 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RtcbQ99LF4 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RtcbQ99LF4 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC15.93■□□□□ 0.14
RtcbQ99LF4 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RtcbQ99LF4 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
RtcbQ99LF4 Gm13408-201ENSMUST00000119822 798 ntBASIC15.93■□□□□ 0.14
RtcbQ99LF4 Gm13935-201ENSMUST00000121859 798 ntBASIC15.93■□□□□ 0.14
RtcbQ99LF4 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC15.93■□□□□ 0.14
RtcbQ99LF4 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC15.93■□□□□ 0.14
RtcbQ99LF4 Gm16296-201ENSMUST00000159905 325 ntBASIC15.93■□□□□ 0.14
RtcbQ99LF4 Gm29615-201ENSMUST00000185371 697 ntBASIC15.93■□□□□ 0.14
RtcbQ99LF4 Gm28224-201ENSMUST00000186078 697 ntBASIC15.93■□□□□ 0.14
RtcbQ99LF4 Gm29001-201ENSMUST00000186177 697 ntBASIC15.93■□□□□ 0.14
RtcbQ99LF4 Gm28292-201ENSMUST00000186593 697 ntBASIC15.93■□□□□ 0.14
RtcbQ99LF4 Gm28101-201ENSMUST00000187608 697 ntBASIC15.93■□□□□ 0.14
RtcbQ99LF4 Gm29076-201ENSMUST00000187689 697 ntBASIC15.93■□□□□ 0.14
RtcbQ99LF4 Gm28302-201ENSMUST00000187931 697 ntBASIC15.93■□□□□ 0.14
RtcbQ99LF4 Gm28646-201ENSMUST00000188220 697 ntBASIC15.93■□□□□ 0.14
RtcbQ99LF4 Gm28205-201ENSMUST00000189177 697 ntBASIC15.93■□□□□ 0.14
RtcbQ99LF4 Gm29032-201ENSMUST00000189797 697 ntBASIC15.93■□□□□ 0.14
RtcbQ99LF4 Gm28695-201ENSMUST00000190300 697 ntBASIC15.93■□□□□ 0.14
RtcbQ99LF4 Gm37448-201ENSMUST00000192795 697 ntBASIC15.93■□□□□ 0.14
RtcbQ99LF4 Gm9555-201ENSMUST00000200908 583 ntBASIC15.93■□□□□ 0.14
RtcbQ99LF4 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RtcbQ99LF4 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RtcbQ99LF4 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RtcbQ99LF4 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
RtcbQ99LF4 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
RtcbQ99LF4 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RtcbQ99LF4 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RtcbQ99LF4 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RtcbQ99LF4 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RtcbQ99LF4 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
RtcbQ99LF4 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RtcbQ99LF4 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
RtcbQ99LF4 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RtcbQ99LF4 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
RtcbQ99LF4 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
RtcbQ99LF4 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RtcbQ99LF4 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
RtcbQ99LF4 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
RtcbQ99LF4 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RtcbQ99LF4 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
RtcbQ99LF4 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC15.92■□□□□ 0.14
RtcbQ99LF4 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RtcbQ99LF4 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC15.92■□□□□ 0.14
RtcbQ99LF4 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC15.92■□□□□ 0.14
RtcbQ99LF4 Gm5732-201ENSMUST00000182596 1007 ntBASIC15.92■□□□□ 0.14
RtcbQ99LF4 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC15.92■□□□□ 0.14
RtcbQ99LF4 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RtcbQ99LF4 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RtcbQ99LF4 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RtcbQ99LF4 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RtcbQ99LF4 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RtcbQ99LF4 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RtcbQ99LF4 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RtcbQ99LF4 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RtcbQ99LF4 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
RtcbQ99LF4 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RtcbQ99LF4 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC15.92■□□□□ 0.14
RtcbQ99LF4 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
RtcbQ99LF4 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RtcbQ99LF4 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RtcbQ99LF4 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RtcbQ99LF4 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC15.91■□□□□ 0.14
RtcbQ99LF4 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RtcbQ99LF4 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RtcbQ99LF4 AC159649.2-201ENSMUST00000222984 3223 ntBASIC15.91■□□□□ 0.14
RtcbQ99LF4 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
RtcbQ99LF4 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC15.91■□□□□ 0.14
RtcbQ99LF4 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC15.91■□□□□ 0.14
RtcbQ99LF4 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
RtcbQ99LF4 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RtcbQ99LF4 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RtcbQ99LF4 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RtcbQ99LF4 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC15.91■□□□□ 0.14
RtcbQ99LF4 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RtcbQ99LF4 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RtcbQ99LF4 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RtcbQ99LF4 Gm14665-201ENSMUST00000122294 557 ntBASIC15.91■□□□□ 0.14
RtcbQ99LF4 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RtcbQ99LF4 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC15.91■□□□□ 0.14
RtcbQ99LF4 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC15.91■□□□□ 0.14
RtcbQ99LF4 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC15.91■□□□□ 0.14
RtcbQ99LF4 Gm19187-201ENSMUST00000206781 892 ntBASIC15.91■□□□□ 0.14
RtcbQ99LF4 Gm44545-201ENSMUST00000208262 746 ntBASIC15.91■□□□□ 0.14
RtcbQ99LF4 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC15.91■□□□□ 0.14
RtcbQ99LF4 AC154276.3-201ENSMUST00000227643 998 ntBASIC15.91■□□□□ 0.14
RtcbQ99LF4 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RtcbQ99LF4 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RtcbQ99LF4 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms