Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Thumpd1Q99J36 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Thumpd1Q99J36 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Thumpd1Q99J36 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC11.57□□□□□ -0.56
Thumpd1Q99J36 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Thumpd1Q99J36 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Thumpd1Q99J36 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC11.57□□□□□ -0.56
Thumpd1Q99J36 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Thumpd1Q99J36 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Thumpd1Q99J36 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Thumpd1Q99J36 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Thumpd1Q99J36 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Thumpd1Q99J36 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Thumpd1Q99J36 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Thumpd1Q99J36 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC11.57□□□□□ -0.56
Thumpd1Q99J36 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Thumpd1Q99J36 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Thumpd1Q99J36 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC11.57□□□□□ -0.56
Thumpd1Q99J36 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Thumpd1Q99J36 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Thumpd1Q99J36 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Thumpd1Q99J36 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Thumpd1Q99J36 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Thumpd1Q99J36 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Thumpd1Q99J36 Gm44292-201ENSMUST00000205194 2364 ntBASIC11.56□□□□□ -0.56
Thumpd1Q99J36 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Thumpd1Q99J36 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Thumpd1Q99J36 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Thumpd1Q99J36 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Thumpd1Q99J36 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Thumpd1Q99J36 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Thumpd1Q99J36 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Thumpd1Q99J36 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Thumpd1Q99J36 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Thumpd1Q99J36 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Thumpd1Q99J36 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Thumpd1Q99J36 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC11.56□□□□□ -0.56
Thumpd1Q99J36 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC11.56□□□□□ -0.56
Thumpd1Q99J36 Gm11400-201ENSMUST00000120853 1214 ntBASIC11.56□□□□□ -0.56
Thumpd1Q99J36 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC11.56□□□□□ -0.56
Thumpd1Q99J36 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC11.56□□□□□ -0.56
Thumpd1Q99J36 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Thumpd1Q99J36 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Thumpd1Q99J36 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Thumpd1Q99J36 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Thumpd1Q99J36 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC11.56□□□□□ -0.56
Thumpd1Q99J36 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Thumpd1Q99J36 Rbfox2-208ENSMUST00000227930 1218 ntBASIC11.56□□□□□ -0.56
Thumpd1Q99J36 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Thumpd1Q99J36 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC11.56□□□□□ -0.56
Thumpd1Q99J36 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Thumpd1Q99J36 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Thumpd1Q99J36 Paupar-201ENSMUST00000194826 3482 ntBASIC11.56□□□□□ -0.56
Thumpd1Q99J36 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Thumpd1Q99J36 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Thumpd1Q99J36 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Thumpd1Q99J36 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC11.56□□□□□ -0.56
Thumpd1Q99J36 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Thumpd1Q99J36 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Thumpd1Q99J36 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Thumpd1Q99J36 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC11.56□□□□□ -0.56
Thumpd1Q99J36 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Thumpd1Q99J36 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC11.55□□□□□ -0.56
Thumpd1Q99J36 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Thumpd1Q99J36 AC157950.1-201ENSMUST00000217561 2168 ntBASIC11.55□□□□□ -0.56
Thumpd1Q99J36 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Thumpd1Q99J36 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Thumpd1Q99J36 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Thumpd1Q99J36 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Thumpd1Q99J36 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Thumpd1Q99J36 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Thumpd1Q99J36 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC11.55□□□□□ -0.56
Thumpd1Q99J36 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Thumpd1Q99J36 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Thumpd1Q99J36 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Thumpd1Q99J36 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC11.55□□□□□ -0.56
Thumpd1Q99J36 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Thumpd1Q99J36 Gm4875-201ENSMUST00000118257 786 ntBASIC11.55□□□□□ -0.56
Thumpd1Q99J36 Gm24513-201ENSMUST00000174964 138 ntBASIC11.55□□□□□ -0.56
Thumpd1Q99J36 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Thumpd1Q99J36 AC073947.2-201ENSMUST00000215888 1130 ntBASIC11.55□□□□□ -0.56
Thumpd1Q99J36 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Thumpd1Q99J36 Gm6888-201ENSMUST00000221983 706 ntBASIC11.55□□□□□ -0.56
Thumpd1Q99J36 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Thumpd1Q99J36 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Thumpd1Q99J36 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC11.55□□□□□ -0.56
Thumpd1Q99J36 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Thumpd1Q99J36 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Thumpd1Q99J36 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC11.55□□□□□ -0.56
Thumpd1Q99J36 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Thumpd1Q99J36 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Thumpd1Q99J36 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Thumpd1Q99J36 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Thumpd1Q99J36 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Thumpd1Q99J36 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Thumpd1Q99J36 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Thumpd1Q99J36 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Thumpd1Q99J36 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Thumpd1Q99J36 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Thumpd1Q99J36 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms