Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Col20a1Q923P0 Gm38000-201ENSMUST00000192390 1215 ntBASIC15.28■□□□□ 0.04
Col20a1Q923P0 Gm9004-201ENSMUST00000218739 1222 ntBASIC15.28■□□□□ 0.04
Col20a1Q923P0 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col20a1Q923P0 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col20a1Q923P0 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col20a1Q923P0 Gm22058-201ENSMUST00000083393 310 ntBASIC15.28■□□□□ 0.04
Col20a1Q923P0 Gm44094-201ENSMUST00000204703 2030 ntBASIC15.28■□□□□ 0.04
Col20a1Q923P0 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col20a1Q923P0 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col20a1Q923P0 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col20a1Q923P0 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col20a1Q923P0 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Col20a1Q923P0 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col20a1Q923P0 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Col20a1Q923P0 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC15.28■□□□□ 0.04
Col20a1Q923P0 Gm37827-201ENSMUST00000194486 1542 ntBASIC15.28■□□□□ 0.04
Col20a1Q923P0 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col20a1Q923P0 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col20a1Q923P0 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col20a1Q923P0 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col20a1Q923P0 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Col20a1Q923P0 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Col20a1Q923P0 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Col20a1Q923P0 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Col20a1Q923P0 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Col20a1Q923P0 Gm7789-202ENSMUST00000211273 1400 ntBASIC15.27■□□□□ 0.04
Col20a1Q923P0 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Col20a1Q923P0 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC15.27■□□□□ 0.04
Col20a1Q923P0 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Col20a1Q923P0 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Col20a1Q923P0 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Col20a1Q923P0 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC15.27■□□□□ 0.04
Col20a1Q923P0 Gm38241-201ENSMUST00000192641 898 ntBASIC15.27■□□□□ 0.04
Col20a1Q923P0 Gm4857-201ENSMUST00000192718 785 ntBASIC15.27■□□□□ 0.04
Col20a1Q923P0 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC15.27■□□□□ 0.04
Col20a1Q923P0 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC15.27■□□□□ 0.04
Col20a1Q923P0 Gm30285-201ENSMUST00000214614 422 ntBASIC15.27■□□□□ 0.04
Col20a1Q923P0 AC122371.3-201ENSMUST00000223402 1061 ntBASIC15.27■□□□□ 0.04
Col20a1Q923P0 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Col20a1Q923P0 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Col20a1Q923P0 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Col20a1Q923P0 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Col20a1Q923P0 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Col20a1Q923P0 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Col20a1Q923P0 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Col20a1Q923P0 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Col20a1Q923P0 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Col20a1Q923P0 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Col20a1Q923P0 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC15.27■□□□□ 0.03
Col20a1Q923P0 Gm4366-201ENSMUST00000201488 1342 ntBASIC15.27■□□□□ 0.03
Col20a1Q923P0 Gm3287-205ENSMUST00000228893 1332 ntBASIC15.27■□□□□ 0.03
Col20a1Q923P0 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Col20a1Q923P0 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Col20a1Q923P0 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Col20a1Q923P0 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Col20a1Q923P0 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC15.27■□□□□ 0.03
Col20a1Q923P0 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC15.27■□□□□ 0.03
Col20a1Q923P0 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Col20a1Q923P0 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Col20a1Q923P0 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Col20a1Q923P0 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC15.27■□□□□ 0.03
Col20a1Q923P0 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Col20a1Q923P0 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col20a1Q923P0 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Col20a1Q923P0 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col20a1Q923P0 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col20a1Q923P0 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Col20a1Q923P0 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col20a1Q923P0 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Col20a1Q923P0 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col20a1Q923P0 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col20a1Q923P0 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col20a1Q923P0 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC15.26■□□□□ 0.03
Col20a1Q923P0 Gm14726-201ENSMUST00000120623 896 ntBASIC15.26■□□□□ 0.03
Col20a1Q923P0 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Col20a1Q923P0 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Col20a1Q923P0 Gm26956-201ENSMUST00000182176 986 ntBASIC15.26■□□□□ 0.03
Col20a1Q923P0 Gm8176-201ENSMUST00000191297 1099 ntBASIC15.26■□□□□ 0.03
Col20a1Q923P0 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Col20a1Q923P0 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC15.26■□□□□ 0.03
Col20a1Q923P0 Gm19963-201ENSMUST00000208413 1255 ntBASIC15.26■□□□□ 0.03
Col20a1Q923P0 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC15.26■□□□□ 0.03
Col20a1Q923P0 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC15.26■□□□□ 0.03
Col20a1Q923P0 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC15.26■□□□□ 0.03
Col20a1Q923P0 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
Col20a1Q923P0 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Col20a1Q923P0 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col20a1Q923P0 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col20a1Q923P0 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col20a1Q923P0 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Col20a1Q923P0 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Col20a1Q923P0 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Col20a1Q923P0 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col20a1Q923P0 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col20a1Q923P0 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col20a1Q923P0 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC15.26■□□□□ 0.03
Col20a1Q923P0 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC15.26■□□□□ 0.03
Col20a1Q923P0 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col20a1Q923P0 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms