Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb1Q91Y08 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb1Q91Y08 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb1Q91Y08 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb1Q91Y08 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb1Q91Y08 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb1Q91Y08 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb1Q91Y08 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb1Q91Y08 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.48□□□□□ -0.25
Pcdhb1Q91Y08 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC13.48□□□□□ -0.25
Pcdhb1Q91Y08 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Pcdhb1Q91Y08 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb1Q91Y08 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb1Q91Y08 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb1Q91Y08 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC13.48□□□□□ -0.25
Pcdhb1Q91Y08 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb1Q91Y08 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
Pcdhb1Q91Y08 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb1Q91Y08 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC13.48□□□□□ -0.25
Pcdhb1Q91Y08 Gm43045-201ENSMUST00000198725 2095 ntBASIC13.48□□□□□ -0.25
Pcdhb1Q91Y08 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb1Q91Y08 Gm8805-201ENSMUST00000117848 313 ntBASIC13.48□□□□□ -0.25
Pcdhb1Q91Y08 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC13.48□□□□□ -0.25
Pcdhb1Q91Y08 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC13.48□□□□□ -0.25
Pcdhb1Q91Y08 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb1Q91Y08 Gm8652-201ENSMUST00000181363 964 ntBASIC13.48□□□□□ -0.25
Pcdhb1Q91Y08 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC13.48□□□□□ -0.25
Pcdhb1Q91Y08 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Pcdhb1Q91Y08 Gm7067-201ENSMUST00000207698 1249 ntBASIC13.48□□□□□ -0.25
Pcdhb1Q91Y08 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC13.48□□□□□ -0.25
Pcdhb1Q91Y08 AC134254.1-201ENSMUST00000221362 167 ntBASIC13.48□□□□□ -0.25
Pcdhb1Q91Y08 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb1Q91Y08 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb1Q91Y08 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb1Q91Y08 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb1Q91Y08 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Pcdhb1Q91Y08 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb1Q91Y08 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb1Q91Y08 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb1Q91Y08 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC13.48□□□□□ -0.25
Pcdhb1Q91Y08 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Pcdhb1Q91Y08 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb1Q91Y08 Gm10305-201ENSMUST00000195331 2475 ntBASIC13.48□□□□□ -0.25
Pcdhb1Q91Y08 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb1Q91Y08 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb1Q91Y08 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Pcdhb1Q91Y08 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb1Q91Y08 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb1Q91Y08 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb1Q91Y08 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC13.47□□□□□ -0.25
Pcdhb1Q91Y08 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb1Q91Y08 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb1Q91Y08 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Pcdhb1Q91Y08 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb1Q91Y08 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb1Q91Y08 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Pcdhb1Q91Y08 Gm13050-201ENSMUST00000122149 1345 ntBASIC13.47□□□□□ -0.25
Pcdhb1Q91Y08 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb1Q91Y08 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb1Q91Y08 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb1Q91Y08 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb1Q91Y08 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb1Q91Y08 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Pcdhb1Q91Y08 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Pcdhb1Q91Y08 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb1Q91Y08 Gm12203-201ENSMUST00000118235 598 ntBASIC13.47□□□□□ -0.25
Pcdhb1Q91Y08 Gm12209-201ENSMUST00000120089 596 ntBASIC13.47□□□□□ -0.25
Pcdhb1Q91Y08 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC13.47□□□□□ -0.25
Pcdhb1Q91Y08 Gm37497-201ENSMUST00000195830 798 ntBASIC13.47□□□□□ -0.25
Pcdhb1Q91Y08 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC13.47□□□□□ -0.25
Pcdhb1Q91Y08 Gm2824-203ENSMUST00000226189 1228 ntBASIC13.47□□□□□ -0.25
Pcdhb1Q91Y08 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb1Q91Y08 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC13.47□□□□□ -0.25
Pcdhb1Q91Y08 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb1Q91Y08 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb1Q91Y08 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC13.47□□□□□ -0.25
Pcdhb1Q91Y08 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Pcdhb1Q91Y08 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Pcdhb1Q91Y08 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb1Q91Y08 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC13.47□□□□□ -0.25
Pcdhb1Q91Y08 Gm28323-201ENSMUST00000186817 2499 ntBASIC13.47□□□□□ -0.25
Pcdhb1Q91Y08 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb1Q91Y08 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Pcdhb1Q91Y08 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb1Q91Y08 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.46□□□□□ -0.25
Pcdhb1Q91Y08 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC13.46□□□□□ -0.25
Pcdhb1Q91Y08 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb1Q91Y08 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb1Q91Y08 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC13.46□□□□□ -0.25
Pcdhb1Q91Y08 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb1Q91Y08 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb1Q91Y08 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb1Q91Y08 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb1Q91Y08 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb1Q91Y08 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb1Q91Y08 Gm11637-201ENSMUST00000120601 592 ntBASIC13.46□□□□□ -0.25
Pcdhb1Q91Y08 Gm13813-201ENSMUST00000120998 787 ntBASIC13.46□□□□□ -0.25
Pcdhb1Q91Y08 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb1Q91Y08 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC13.46□□□□□ -0.25
Pcdhb1Q91Y08 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC13.46□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms