Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb22Q91XZ8 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC15.15■□□□□ 0.02
Pcdhb22Q91XZ8 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb22Q91XZ8 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb22Q91XZ8 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb22Q91XZ8 Mir1982-201ENSMUST00000157368 74 ntBASIC15.15■□□□□ 0.02
Pcdhb22Q91XZ8 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC15.15■□□□□ 0.02
Pcdhb22Q91XZ8 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC15.15■□□□□ 0.02
Pcdhb22Q91XZ8 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Pcdhb22Q91XZ8 Gm21868-201ENSMUST00000185623 1230 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb22Q91XZ8 Gm20803-202ENSMUST00000190968 1230 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb22Q91XZ8 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb22Q91XZ8 Gm9396-201ENSMUST00000076703 567 ntBASIC15.15■□□□□ 0.02
Pcdhb22Q91XZ8 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb22Q91XZ8 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb22Q91XZ8 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb22Q91XZ8 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb22Q91XZ8 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb22Q91XZ8 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb22Q91XZ8 Gm43570-201ENSMUST00000199951 3688 ntBASIC15.14■□□□□ 0.01
Pcdhb22Q91XZ8 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb22Q91XZ8 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb22Q91XZ8 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC15.14■□□□□ 0.01
Pcdhb22Q91XZ8 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb22Q91XZ8 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb22Q91XZ8 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb22Q91XZ8 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb22Q91XZ8 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Pcdhb22Q91XZ8 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb22Q91XZ8 Gm23363-201ENSMUST00000175024 79 ntBASIC15.14■□□□□ 0.01
Pcdhb22Q91XZ8 Gm32025-201ENSMUST00000217960 307 ntBASIC15.14■□□□□ 0.01
Pcdhb22Q91XZ8 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb22Q91XZ8 Mir339-201ENSMUST00000083659 96 ntBASIC15.14■□□□□ 0.01
Pcdhb22Q91XZ8 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
Pcdhb22Q91XZ8 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb22Q91XZ8 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb22Q91XZ8 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb22Q91XZ8 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb22Q91XZ8 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC15.14■□□□□ 0.01
Pcdhb22Q91XZ8 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC15.14■□□□□ 0.01
Pcdhb22Q91XZ8 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb22Q91XZ8 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb22Q91XZ8 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb22Q91XZ8 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb22Q91XZ8 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb22Q91XZ8 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb22Q91XZ8 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb22Q91XZ8 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb22Q91XZ8 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb22Q91XZ8 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb22Q91XZ8 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb22Q91XZ8 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb22Q91XZ8 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Pcdhb22Q91XZ8 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb22Q91XZ8 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Pcdhb22Q91XZ8 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC15.13■□□□□ 0.01
Pcdhb22Q91XZ8 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb22Q91XZ8 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb22Q91XZ8 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC15.13■□□□□ 0.01
Pcdhb22Q91XZ8 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb22Q91XZ8 Gm18916-201ENSMUST00000198264 1246 ntBASIC15.13■□□□□ 0.01
Pcdhb22Q91XZ8 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC15.13■□□□□ 0.01
Pcdhb22Q91XZ8 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb22Q91XZ8 AC093022.5-201ENSMUST00000226841 1079 ntBASIC15.13■□□□□ 0.01
Pcdhb22Q91XZ8 AC126253.1-201ENSMUST00000227974 824 ntBASIC15.13■□□□□ 0.01
Pcdhb22Q91XZ8 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb22Q91XZ8 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb22Q91XZ8 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb22Q91XZ8 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb22Q91XZ8 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb22Q91XZ8 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC15.13■□□□□ 0.01
Pcdhb22Q91XZ8 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Pcdhb22Q91XZ8 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb22Q91XZ8 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb22Q91XZ8 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb22Q91XZ8 Gm43364-201ENSMUST00000196046 3274 ntBASIC15.12■□□□□ 0.01
Pcdhb22Q91XZ8 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb22Q91XZ8 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Pcdhb22Q91XZ8 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb22Q91XZ8 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC15.12■□□□□ 0.01
Pcdhb22Q91XZ8 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb22Q91XZ8 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb22Q91XZ8 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb22Q91XZ8 CT025610.1-201ENSMUST00000224552 1786 ntBASIC15.12■□□□□ 0.01
Pcdhb22Q91XZ8 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Pcdhb22Q91XZ8 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Pcdhb22Q91XZ8 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC15.12■□□□□ 0.01
Pcdhb22Q91XZ8 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC15.12■□□□□ 0.01
Pcdhb22Q91XZ8 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb22Q91XZ8 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC15.12■□□□□ 0.01
Pcdhb22Q91XZ8 Gm28510-201ENSMUST00000190572 928 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb22Q91XZ8 AC022775.2-201ENSMUST00000227885 646 ntBASIC15.12■□□□□ 0.01
Pcdhb22Q91XZ8 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb22Q91XZ8 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb22Q91XZ8 Snora73a-201ENSMUST00000082453 205 ntBASIC15.12■□□□□ 0.01
Pcdhb22Q91XZ8 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb22Q91XZ8 Gm15897-201ENSMUST00000117770 1486 ntBASIC15.12■□□□□ 0.01
Pcdhb22Q91XZ8 Gm44775-201ENSMUST00000207266 1456 ntBASIC15.12■□□□□ 0.01
Pcdhb22Q91XZ8 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb22Q91XZ8 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms