Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb4Q91XZ6 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Pcdhb4Q91XZ6 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb4Q91XZ6 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb4Q91XZ6 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb4Q91XZ6 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb4Q91XZ6 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb4Q91XZ6 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.92□□□□□ -0.34
Pcdhb4Q91XZ6 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb4Q91XZ6 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb4Q91XZ6 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb4Q91XZ6 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb4Q91XZ6 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb4Q91XZ6 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb4Q91XZ6 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Pcdhb4Q91XZ6 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb4Q91XZ6 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb4Q91XZ6 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb4Q91XZ6 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb4Q91XZ6 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb4Q91XZ6 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb4Q91XZ6 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.92□□□□□ -0.34
Pcdhb4Q91XZ6 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb4Q91XZ6 Gm12341-201ENSMUST00000119724 503 ntBASIC12.92□□□□□ -0.34
Pcdhb4Q91XZ6 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb4Q91XZ6 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb4Q91XZ6 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.92□□□□□ -0.34
Pcdhb4Q91XZ6 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
Pcdhb4Q91XZ6 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC12.92□□□□□ -0.34
Pcdhb4Q91XZ6 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb4Q91XZ6 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb4Q91XZ6 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb4Q91XZ6 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb4Q91XZ6 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb4Q91XZ6 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.92□□□□□ -0.34
Pcdhb4Q91XZ6 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb4Q91XZ6 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb4Q91XZ6 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.92□□□□□ -0.34
Pcdhb4Q91XZ6 Gm26315-201ENSMUST00000083890 321 ntBASIC12.92□□□□□ -0.34
Pcdhb4Q91XZ6 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb4Q91XZ6 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Pcdhb4Q91XZ6 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb4Q91XZ6 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb4Q91XZ6 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb4Q91XZ6 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb4Q91XZ6 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Pcdhb4Q91XZ6 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb4Q91XZ6 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb4Q91XZ6 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC12.92□□□□□ -0.34
Pcdhb4Q91XZ6 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb4Q91XZ6 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb4Q91XZ6 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb4Q91XZ6 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb4Q91XZ6 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Pcdhb4Q91XZ6 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb4Q91XZ6 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb4Q91XZ6 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb4Q91XZ6 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb4Q91XZ6 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb4Q91XZ6 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb4Q91XZ6 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb4Q91XZ6 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.91□□□□□ -0.34
Pcdhb4Q91XZ6 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb4Q91XZ6 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb4Q91XZ6 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb4Q91XZ6 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.91□□□□□ -0.34
Pcdhb4Q91XZ6 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb4Q91XZ6 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC12.91□□□□□ -0.34
Pcdhb4Q91XZ6 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
Pcdhb4Q91XZ6 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC12.91□□□□□ -0.34
Pcdhb4Q91XZ6 Gm18307-201ENSMUST00000206864 949 ntBASIC12.91□□□□□ -0.34
Pcdhb4Q91XZ6 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC12.91□□□□□ -0.34
Pcdhb4Q91XZ6 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb4Q91XZ6 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb4Q91XZ6 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb4Q91XZ6 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb4Q91XZ6 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Pcdhb4Q91XZ6 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb4Q91XZ6 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb4Q91XZ6 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb4Q91XZ6 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb4Q91XZ6 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.91□□□□□ -0.34
Pcdhb4Q91XZ6 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Pcdhb4Q91XZ6 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb4Q91XZ6 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb4Q91XZ6 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Pcdhb4Q91XZ6 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb4Q91XZ6 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb4Q91XZ6 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb4Q91XZ6 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.91□□□□□ -0.34
Pcdhb4Q91XZ6 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb4Q91XZ6 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb4Q91XZ6 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb4Q91XZ6 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb4Q91XZ6 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb4Q91XZ6 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb4Q91XZ6 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Pcdhb4Q91XZ6 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb4Q91XZ6 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.9□□□□□ -0.34
Pcdhb4Q91XZ6 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 322.9 ms