Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Gm9678-201ENSMUST00000198979 1149 ntBASIC14.82□□□□□ -0.04
Trex1Q91XB0 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC14.82□□□□□ -0.04
Trex1Q91XB0 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC14.82□□□□□ -0.04
Trex1Q91XB0 Gm45925-201ENSMUST00000218882 744 ntBASIC14.82□□□□□ -0.04
Trex1Q91XB0 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC14.82□□□□□ -0.04
Trex1Q91XB0 AC113031.8-201ENSMUST00000227856 631 ntBASIC14.82□□□□□ -0.04
Trex1Q91XB0 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trex1Q91XB0 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trex1Q91XB0 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trex1Q91XB0 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC14.82□□□□□ -0.04
Trex1Q91XB0 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trex1Q91XB0 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trex1Q91XB0 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC14.82□□□□□ -0.04
Trex1Q91XB0 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trex1Q91XB0 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC14.82□□□□□ -0.04
Trex1Q91XB0 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trex1Q91XB0 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trex1Q91XB0 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC14.82□□□□□ -0.04
Trex1Q91XB0 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Trex1Q91XB0 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trex1Q91XB0 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trex1Q91XB0 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC14.82□□□□□ -0.04
Trex1Q91XB0 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trex1Q91XB0 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trex1Q91XB0 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trex1Q91XB0 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trex1Q91XB0 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trex1Q91XB0 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trex1Q91XB0 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trex1Q91XB0 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trex1Q91XB0 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC14.81□□□□□ -0.04
Trex1Q91XB0 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trex1Q91XB0 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trex1Q91XB0 Gm14921-201ENSMUST00000118643 908 ntBASIC14.81□□□□□ -0.04
Trex1Q91XB0 Gm14017-201ENSMUST00000121934 386 ntBASIC14.81□□□□□ -0.04
Trex1Q91XB0 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trex1Q91XB0 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trex1Q91XB0 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trex1Q91XB0 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC14.81□□□□□ -0.04
Trex1Q91XB0 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC14.81□□□□□ -0.04
Trex1Q91XB0 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trex1Q91XB0 Gm7619-201ENSMUST00000210649 1282 ntBASIC14.81□□□□□ -0.04
Trex1Q91XB0 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC14.81□□□□□ -0.04
Trex1Q91XB0 AC155637.1-201ENSMUST00000218560 636 ntBASIC14.81□□□□□ -0.04
Trex1Q91XB0 AC108416.1-202ENSMUST00000228927 1201 ntBASIC14.81□□□□□ -0.04
Trex1Q91XB0 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trex1Q91XB0 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trex1Q91XB0 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trex1Q91XB0 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trex1Q91XB0 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trex1Q91XB0 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trex1Q91XB0 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Trex1Q91XB0 Gm45242-201ENSMUST00000210666 2129 ntBASIC14.81□□□□□ -0.04
Trex1Q91XB0 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trex1Q91XB0 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Trex1Q91XB0 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trex1Q91XB0 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Trex1Q91XB0 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trex1Q91XB0 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trex1Q91XB0 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trex1Q91XB0 Gm11405-201ENSMUST00000118689 1556 ntBASIC14.81□□□□□ -0.04
Trex1Q91XB0 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trex1Q91XB0 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trex1Q91XB0 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Trex1Q91XB0 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trex1Q91XB0 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trex1Q91XB0 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trex1Q91XB0 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trex1Q91XB0 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Trex1Q91XB0 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trex1Q91XB0 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trex1Q91XB0 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC14.8□□□□□ -0.04
Trex1Q91XB0 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trex1Q91XB0 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trex1Q91XB0 Gm24990-201ENSMUST00000157406 323 ntBASIC14.8□□□□□ -0.04
Trex1Q91XB0 Gm16296-201ENSMUST00000159905 325 ntBASIC14.8□□□□□ -0.04
Trex1Q91XB0 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trex1Q91XB0 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trex1Q91XB0 Gm27046-201ENSMUST00000182160 463 ntBASIC14.8□□□□□ -0.04
Trex1Q91XB0 Gm8885-201ENSMUST00000189382 598 ntBASIC14.8□□□□□ -0.04
Trex1Q91XB0 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trex1Q91XB0 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC14.8□□□□□ -0.04
Trex1Q91XB0 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Trex1Q91XB0 Gm8712-201ENSMUST00000221090 701 ntBASIC14.8□□□□□ -0.04
Trex1Q91XB0 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trex1Q91XB0 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trex1Q91XB0 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trex1Q91XB0 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trex1Q91XB0 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trex1Q91XB0 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trex1Q91XB0 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trex1Q91XB0 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC14.8□□□□□ -0.04
Trex1Q91XB0 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trex1Q91XB0 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trex1Q91XB0 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trex1Q91XB0 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trex1Q91XB0 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC14.79□□□□□ -0.04
Trex1Q91XB0 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trex1Q91XB0 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC14.79□□□□□ -0.04
Trex1Q91XB0 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms